Zingiber officinale (ginger): 122017316
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Entry
122017316 CDS
T08725
Name
(RefSeq) stromal 70 kDa heat shock-related protein, chloroplastic-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
zof04141
Protein processing in endoplasmic reticulum
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122017316
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122017316
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122017316
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122017316
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122017316
03009 Ribosome biogenesis [BR:
zof03009
]
122017316
03110 Chaperones and folding catalysts [BR:
zof03110
]
122017316
04131 Membrane trafficking [BR:
zof04131
]
122017316
03051 Proteasome [BR:
zof03051
]
122017316
03029 Mitochondrial biogenesis [BR:
zof03029
]
122017316
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122017316
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122017316
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19 complex
122017316
Complex C
Prp19-CDC5 complex
122017316
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122017316
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122017316
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122017316
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122017316
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122017316
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122017316
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122017316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
ParM_N
FtsA
PilM_2
FGGY_C
Hydantoinase_A
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
122017316
NCBI-ProteinID:
XP_042430834
LinkDB
All DBs
Position
1A:complement(8799326..8806664)
Genome browser
AA seq
702 aa
AA seq
DB search
MATSSVQIHVLGSSSGAFPSSKLPFSRLPASSNSLFFGLRRPTGVRLASGRPAHGTGYRP
LQVVCEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYSKNGDRLVGQIAKR
QAVVNPENTFFSVKRFIGRKMLEVDEESKQVSYRVLRDENGNVKLDCPAIGKQFAAEEIS
AQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAAS
LAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLA
SDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTIT
RAKFEELCSDLLDRLRTPVNNALKDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGKDP
NVTVNPDEVVALGAAVQAGVLSGDVSDIVLLDVTPLSIGLETLGGVMTKIIPRNTTLPTS
KSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDAN
GILSVTAVDKGTGKKQDITITGASTLPSDEVERMVNEAEKFAKEDKEKRDVIDTKNQSES
VIYQTEKQLKDLEDKVPAAVKEKVDAKLKDLKDAVANESTQGMKDAMAALNQEVMQLGQS
LYNQPGATGAGPAPGADADSAGTSSKGADNDDVIDADFTDSK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgtcggtgcagatccatgtactaggctcctcctccggcgccttcccctct
tctaagttgccgttctcccgccttcctgcttcttccaattccctcttcttcggcctccgc
cgaccgactggagttcgactcgcttcagggcgtccggctcatgggactggatataggcct
ttgcaggtggtatgcgagaaggtggttgggatcgatcttggcaccactaactcggccgtc
gccgccatggagggaggcaagccgacaatagtgaccaacgctgaaggtcagcgaacgact
ccctcagtggtggcctactcgaagaatggagataggttggtggggcagattgccaagcgc
caggcagttgtcaaccccgaaaatacatttttttcagtgaagaggttcattggacggaag
atgttggaagtggacgaagagtcgaagcaagtctcttatcgggtcttgagagatgagaat
ggaaatgtcaagcttgattgccctgccatcggaaaacagtttgctgctgaagagatctca
gctcaggttttaagaaagctcgtggatgatgcatccaagtttttgaatgataaggttaca
aaagccgtggttactgttcctgcttacttcaatgactctcaaaggacagctacaaaggat
gctgggcgtattgctggtttagaggtccttcgtatcattaatgagccaacagctgcatca
ttggcttatggatttgaaaagaagaacaatgaaactatcctggtatttgatttgggtggt
ggcactttcgatgtttcagttctagaggttggagatggtgtttttgaggtgctttcaaca
tctggggacacacatcttggtggtgacgattttgacaagagaattgttgactggcttgct
tctgacttcaagagagatgaaggaattgatcttttgaaagacaaacaagcccttcagaga
ttaactgaaactgctgaaaaggctaagatggagttgtcctccttgactcaaacaaacatt
agtttaccttttatcacggcgactgctgatggtcccaaacatatagagacaacaattaca
agagccaaatttgaggaactttgttcagatcttcttgacaggctaagaacccctgttaat
aatgcattgaaagatgcaaaactctcatttaaggatttagatgaggtaatccttgttggt
gggtcaactcgtatcccagcagttcaggaacttgtgaagaagatgactgggaaggatcct
aatgtcactgtcaatcctgatgaggttgttgctcttggtgctgcagtgcaggcaggagta
ttgtctggggatgtcagtgatattgtgcttcttgatgtcacaccgttgtccattggtttg
gagacattgggtggggtcatgacaaagattattccgaggaacacaacattgccaacatcc
aaatcagaagtcttctctacagcagcagatggtcagacaagcgttgagataaatgttctt
cagggagaaagagagtttgtgcgagacaacaagtcgctcggcagtttccgtcttgatggg
atccctccagcaccacgaggggttcctcaaatcgaagtcaagtttgacatcgatgccaat
ggaatcctgtctgtcactgctgtggacaagggcactggaaagaaacaagatatcaccatt
actggggctagtactttacctagcgacgaggtggaaagaatggttaatgaagctgagaag
tttgccaaagaagacaaggagaagagggatgtcattgacacaaagaaccagtctgagtct
gttatttaccagactgagaaacaactcaaggacctggaagataaggtgcctgctgcggtc
aaggagaaggttgatgcaaagctcaaggatctcaaagatgcagttgcaaacgaatcaaca
cagggtatgaaggatgcaatggctgctctgaaccaggaggtgatgcagcttggtcagtca
ctatacaaccaaccaggtgcgactggtgctggtccagctcctggagctgatgctgattct
gcaggaacatcttccaagggagctgataatgatgatgtgatcgatgccgacttcacagat
agcaagtaa
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