Zingiber officinale (ginger): 122017333
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Entry
122017333 CDS
T08725
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122017333
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122017333
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122017333
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
AAA_16
TIP49
AAA_14
AAA_5
AAA_24
Mg_chelatase
AAA_2
NPHP3_N
AAA_28
IstB_IS21
AAA_33
nSTAND3
AAA_25
ORC-CDC6-like
NACHT
AAA_7
RNA_helicase
AAA_18
AAA_17
Vps4_C
PhoH
Parvo_NS1
DUF815
ABC_tran
bpMoxR
AAA_3
TsaE
AAA_19
NB-ARC
Motif
Other DBs
NCBI-GeneID:
122017333
NCBI-ProteinID:
XP_042430850
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All DBs
Position
8B:8499536..8507368
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AA seq
409 aa
AA seq
DB search
MGDEPLLTRWTFRDFKLVYDVKFGRKKPPKGDKVEEERSSGSDRAGRGYANGAVATSNGS
VKASSDLAVYEQFEQQDRKFKPSAGVILDRSQETTQKPLLPPFESAEMRTLAETLCRDIV
RGNPDVKWESIKGLEDAKRLLKEAVVMPIKYPKYFKGLLSPWKGILLFGPPGTGKTMLAK
AVATECKTTFFNISASSIVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEA
RSEHEASRRLKTELLIQMDGLTKTDDLVFVLAATNLPWELDAAMLRRLEKRILVPLPEPE
ARRAMFEELLPSMPGEAEMPYDLLVDRSEGYSGSDIRLVCKEAAMQPLRRLMMVLEGRQD
VVPEDELPEVGPVNPEDVNLALKNTRPSAHLHTHRYEKFNEDYGSQILH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgaacccttgctcactcgatggaccttccgggatttcaagctagtttatgat
gtgaaattcggaaggaagaagccgccaaagggcgataaggtggaggaggagcgtagttct
ggatcggatcgcgctggaaggggttatgcgaatggggcggtcgccacttccaatgggagc
gtcaaggcctcgtctgacttggctgtttatgagcagttcgaacagcaggatcggaaattt
aagccaagcgccggagttatcttggacagatcacaagaaacaactcagaagcctttgctt
ccaccatttgaatctgctgaaatgcgaactctagcagagacactgtgcagagacattgtt
cgtgggaatccagatgtgaaatgggaaagcatcaaaggattagaggatgcgaaacgactt
ctgaaagaagctgttgtcatgcccataaaatatccaaagtacttcaaaggtcttctatca
ccctggaaaggtattctgctttttggccctcctggaacaggaaagacaatgcttgccaaa
gctgttgctactgagtgcaaaaccacttttttcaacatctcagcatcgtcaattgtcagc
aaatggcgaggtgattctgagaaactggtgaaagtcttatttgagcttgccagacaccat
gcaccatctactattttcctcgatgagattgatgcaatcatcagtcagcgtggtgaggca
cgtagtgagcatgaagcaagtcgacgcttgaagactgaattacttatacagatggatggt
ctgacaaaaacagacgaccttgtctttgtgctagcagcaacaaatcttccttgggagttg
gatgcagctatgctgcgacgacttgaaaagcgaattctggtacctcttccagaaccggaa
gcaagacgtgcgatgtttgaggagcttttgccatctatgcctggagaagctgagatgcca
tatgatcttcttgtggatagaagtgaaggttattcaggctcagatattcgtttagtgtgt
aaagaggcagctatgcagccattaagacgtctaatgatggtcctggaaggcagacaggat
gttgttcctgaggatgaattaccagaggttggtccagtgaaccctgaagatgtcaattta
gctttaaaaaatacaagaccgtcagctcatcttcacacccaccgttatgaaaagttcaac
gaggattatggaagccagattcttcattag
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