Zingiber officinale (ginger): 122017410
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Entry
122017410 CDS
T08725
Name
(RefSeq) putative RNA methyltransferase At5g10620 isoform X1
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122017410
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
122017410
Ribosome biogenesis [BR:
zof03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
122017410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-GeneID:
122017410
NCBI-ProteinID:
XP_042430957
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All DBs
Position
8B:45746339..45750680
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AA seq
195 aa
AA seq
DB search
MEVSLLGQSPTLLSTRLKSSNPASIPPARKSKYSGQAIRTIPLRILTVGKKRSRGVQLLV
EEYMEKLKYYCCVEDVHLKSNPKGSSNVKAQIDAEDSVIMQQIRSEDWVIVLDEHGRDIG
SEQLADLVGDGGQTGSARLAFCIGGPYGHGPQLRKRADVTIRLSSMVLNHQIALIVLLEQ
LYRSWTIIKGQKYHH
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctctctgttgggccaaagccctactcttctctcgactcggttgaagagcagc
aaccctgcctccattcccccagctaggaaatctaagtactccggccaagcaatcagaaca
attccgttacgaatattgacagtcggcaagaagagatccagaggggtgcaactattggtc
gaggagtacatggagaagctcaagtactattgctgcgtcgaggacgtacacttgaagtct
aatccaaaaggtagcagcaatgtgaaagctcagattgatgctgaagacagtgttattatg
cagcaaatcagatctgaagattgggttattgtgttggatgagcatggaagagatattgga
tcagagcaattagctgatttggtgggggatggagggcaaacaggttcagctagacttgca
ttttgcatcggtggcccatacgggcacgggccacagttgcgaaaacgggcagatgtgaca
attcgattatcatctatggtcttgaatcatcagattgcattgatcgtgttgttagagcaa
ctctacagatcatggacgatcatcaaaggccagaagtaccaccattag
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