Zingiber officinale (ginger): 122017478
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Entry
122017478 CDS
T08725
Name
(RefSeq) protein PHYLLO, chloroplastic-like isoform X1
KO
K14759
isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / o-succinylbenzoate synthase [EC:
5.4.4.2
2.2.1.9
4.2.99.20
4.2.1.113
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00130
Ubiquinone and other terpenoid-quinone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122017478
Enzymes [BR:
zof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
122017478
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.113 o-succinylbenzoate synthase
122017478
4.2.99 Other carbon-oxygen lyases
4.2.99.20 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
122017478
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
122017478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
Abhydrolase_6
TPP_enzyme_M_2
Abhydrolase_1
TPP_enzyme_N
Hydrolase_4
TPP_enzyme_C
Abhydrolase_2
Ndr
Abhydrolase_3
BAAT_C
Thioesterase
DLH
DUF1057
Abhydrolase_11
LIDHydrolase
Cutinase
DUF726
Esterase
PGAP1
DUF900
Motif
Other DBs
NCBI-GeneID:
122017478
NCBI-ProteinID:
XP_042431038
LinkDB
All DBs
Position
8B:complement(13836485..13883233)
Genome browser
AA seq
1718 aa
AA seq
DB search
MLALSLLHLSSSSSKPSPFDLLNPRLFPVLPGAISIVGPDLPCRSRLPHRRFRILRSRSE
MEFHVNADRGCHKRGLEIDADRIVGVEDLDLPVDICATRVLPSALSLAAGFDKIKVAVEE
FKVNPPRTRSGVMRFQVEVPPSTKASNWLCCQNKDLLVYPQFYLTTTSSTVEMKRPLEVC
GIGVAVIVHGFLFTPQGSSLISRYLSIDSPLIRAYGFLGNYIDGSLLVEMLSSYFLCIPQ
FVVEEHMGCSILAATLVWDDHMLYTFADAINAFEINVHQMRYYIPQVSTIDKLWMNHADK
KSPLVGKKDIQMVFLNAELLAGWNFSQANNNIQEKELPTSCQFYFRHSSTMSVGTIRIMD
SHGSICLAEDYANINTVWASLIVEECVRLGLTYFCIAPGSRSSPLAIAACRHPYTTCFSS
YDERSLAFHAVGYAKGSHKPAVVITSSGTAVSNLLPAVVEAHHDFTPLILLTADRPPELH
DAGANQSIDQVNHFGKFAKFFGLPAAMDQVPVRMILTTIDSALHYATQVPFGPVHINCPF
REPLEDSPKEWTIDCLKGLDSWFAKTEPYTKYITMQLLFASNNCNSQLAEVTAIIQRAER
GLLLIGAIENEDEIFASSLLVKHLSWPVVCDIMSGLRLRRVLSSFSEMKFLFIDHMDHAL
LSDSVRSWAHPDVVLQLGRRITSKRISQFLEFCSPSSYILVDKFPCRHDPSHIVTHRVQS
TIIEFTHILQKIQFPRQAGRWRTFLNKLNAAVAQEIEFQIYSKCFLTEPYVAHVIGEVLN
DDTSLFIGNSMVIRDIDMYGKGWLSSMSYDYQTVSNLGVEFQGFRVAGNRGASGIDGVLS
TAVGFAVGCNKHVLCLIGDVSFLHDTNGLAILNERVKRKPLTVVVINNHGGGIFSLLPVA
ERANPDVLNKFFYTCHNISIERLCTAHSVKHFLVRTMSELQNALSKSQHEQYDCVIEVES
SIVENANFHRIINKFSSEAANKTLNFLLTNMENRLFTHKIHKVEYSLYRIQLCAPLTSSL
LNGEMESFFHEGFILRIYLDNNIVGLGEVAPIEIHAEDLLDVEEQLRFLVHKLVGSNISF
IPLLRGSFSEWIWRSLAIPASSIFPSVKCGLEMAILNTLAMNEASSFFDVISGYGSSSVE
PLLDADGNDGPKQIEICALIDHSGSPKEIADVVYQLVDEGFNTIKLKVARRKNPLEDVEV
IRAIRQVVGYKINIRVDANRKWTYEEALQFGSCVKHFNLQFIEEPVNREMDILKFCDESS
LPVALDETIDNLKGDLFHGLKKFAHPGIVAIVIKPSVIGGFENAATVAKWAQLHKKIAIV
SSAFESSVSLSVYIQFAYYLERQNAAVCKIEGRELNAALAHGLGTYRWLKEDVTSSGIDI
CMSSDRYRLVASVEKAENFLKLVQINKANIQKSYSEEQTSAYQTEVDGEFFSCSFKFLKV
GQNLNNRTVVFLHGFLGTSEEWIPIIRSISASVHCISIDLPGHGESKLQSLVDKSSKQRL
DLSVESVANILLKLISGITSGKVILVGYSMGARIALNMAVKYKEKVIGAVIISGSPGLRN
ETTKRIRVAQDEAKANFLVEHGLECFLDLWYSGILWRSLRGHPNFSHIKSSRSRHKDIQG
LANVLSSLSVGKQLSLWDDLKHLQTPLLFIVGEKDTKFREIAQQMCSEIKRGSIADHHRQ
RKLFDTIVVPDCGHAVHLENPLCVINAVRKFVERWEQK
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgctcagcttgctccatctctcttcgtcatcctccaaaccctcacccttcgat
ctcctcaatccccgcctctttcccgtcctcccaggcgccattagcatagttggacctgat
ctcccatgtcgatcacgtctcccccaccgtcgcttcaggattctccgttcgcgttcggag
atggagtttcatgtaaatgcagatcgtggttgtcataaaagggggctggagatcgacgct
gatcggatcgtgggagtggaagacttggatttgccggtggatatttgtgcaactcgagtt
ctgccctctgctctttcgctggcggcagggtttgacaagataaaggtggcggtcgaggag
ttcaaggttaacccaccacgtacgaggagcggcgtcatgagattccaggttgaagtacct
cctagtacaaaggcatcgaattggctttgctgtcaaaataaggatcttttggtgtatcct
cagttttatctcacaactacatcatctactgttgagatgaaaagaccactggaagtttgc
gggattggtgttgcagtcattgtccatggttttttgttcaccccacaaggttcaagtctg
atatcaagatatctttcaattgattcacccctgataagagcttatgggttcctaggtaat
tatattgatggttcattgttggtggagatgctcagttcatatttcctctgtattccacag
tttgtggttgaagaacatatgggttgttccattttggcagctaccctggtttgggatgat
catatgttatatacatttgctgatgcaattaatgcctttgagatcaatgttcaccagatg
agatactatattcctcaagttagtaccatcgacaaattatggatgaaccatgctgacaag
aagtcacctttggttgggaagaaagatatacaaatggtttttttgaatgctgaattgctt
gctggatggaatttttctcaagccaataataatattcaggagaaagagcttccaacttcc
tgtcagttttattttaggcattcttccactatgtctgttggaactattaggattatggat
tctcatggctccatttgcttggcagaggattatgcaaacataaacactgtctgggcgtca
cttatagttgaagaatgtgttagattaggtttgacttacttctgtatagctccaggatca
agatcatctccacttgcaattgctgcttgtcgtcatccttacactacttgtttttcatct
tatgacgaacgctcactagcatttcatgctgttgggtatgccaaagggtctcacaaacct
gctgtggtcataacatcatctggcacagctgtgtcaaatcttcttcctgcggttgtggag
gctcatcatgattttactcctcttattttattaacagctgatcgccctccagagctacat
gatgcaggagcaaaccaatctattgatcaggtgaaccactttgggaagtttgcaaagttt
tttggtcttcctgcggcaatggatcaagttcctgtgagaatgattctcacaactattgac
tcagccctgcactatgcaactcaagtgccatttggtcctgttcatattaattgtcccttt
agagaaccactagaagatagtccaaaagaatggacaatagactgtttaaaaggattagac
tcgtggtttgcaaagacagaaccatacactaagtacatcactatgcaacttctctttgca
tccaataattgcaactcccaacttgctgaggttacagcaataatacagagggctgagagg
ggactactccttattggtgctattgagaatgaagatgaaatttttgcatcatctcttttg
gttaaacatttatcatggccagttgtctgtgatatcatgtctggtctaagattgcgtaga
gtattaagttcattttctgagatgaagttcttatttattgatcatatggatcatgctcta
ttgtcagactcggtcaggagctgggcacatccagatgtagttcttcagcttggaagaaga
attacaagcaaaaggattagccaattcctagagttttgttctccatcttcatatatcttg
gttgacaaattcccatgccgccatgacccttcacatatagtgactcacagagttcaaagc
accattattgagtttactcacattttacagaagattcaattcccaagacaggctggaaga
tggagaacttttcttaacaaattgaatgcagcagttgcacaggagatagaatttcaaatt
tactcaaaatgctttcttacagagccatatgttgcacatgtaattggagaagtactcaat
gacgacacttccttgtttatagggaatagcatggtcattagagacatagacatgtatggg
aaaggctggttgagttctatgagctatgattatcaaacagtatcaaatttgggcgtagag
tttcagggttttcgggtggctggaaacagaggtgcaagtggtattgatggagtgcttagc
acagctgttggttttgcagttggatgtaacaagcatgtactttgcttgattggtgatgta
tcttttcttcatgatacaaatggcttggcaattcttaatgaaagggtgaagcggaaaccc
ttaactgttgttgtaataaacaatcatggtggtggaattttcagtcttttaccagttgca
gaaagagctaatcctgatgtactgaacaagttcttctacacatgtcataatatctcaata
gaaagactctgtactgcccatagtgtgaaacattttttagtgcggacgatgtctgaactt
caaaatgctttatccaaatctcagcatgagcagtatgattgcgtgattgaagtcgagagt
agtattgtggaaaatgccaattttcacagaataataaacaaattttcttctgaagctgca
aataagacactgaacttcttattaacaaacatggaaaatcgcctctttacccacaaaatc
cacaaggtggaatactcattgtatagaatccaactttgtgctccactgacttcaagttta
ttaaatggtgaaatggagagtttcttccatgaaggctttatcctaagaatatatttggac
aataatattgtaggattgggcgaggttgccccaattgaaatccatgcagaggatctttta
gatgtcgaagagcagttaaggttcttggtgcataagttggtaggatcaaacataagtttt
attccattgctcagaggctcattttctgaatggatttggagatccttagcaataccagcc
tcatccatttttccaagtgttaagtgtggattggagatggctatcctcaataccctggca
atgaatgaagcatccagtttctttgatgtgatctctggttatgggagctcctcagttgaa
cctctgttggatgcagatggtaatgatggtccaaaacagatagagatttgtgctctcatt
gatcatagtggttcaccaaaagagatagctgatgttgtgtaccaattagttgacgagggt
ttcaacacaataaaactgaaggtagcacgaagaaaaaatcctctggaagatgtagaagtc
atcagagccatcaggcaagtggttggttacaaaatcaacatccgtgttgatgcaaaccgg
aagtggacatatgaggaggcattgcaatttggatcttgtgtaaaacatttcaacttgcaa
ttcattgaggaacctgttaatagggaaatggatattctcaaattttgcgatgaaagcagt
ctgccagtagcactagatgagacaattgacaatcttaagggagatctctttcatggactt
aaaaagttcgctcatccaggaattgttgctattgttatcaaaccgagtgttattggagga
tttgaaaatgcagctacagtagcaaagtgggctcagttgcataagaagatagccattgtc
agtagcgcatttgaaagcagtgtgagtttgtcggtgtatatacagtttgcatattatctg
gagaggcagaatgctgcagtttgcaaaatagagggaagggaattaaatgcagcactagcc
catggccttggaacatatcgttggctgaaggaagatgtaacttccagtggtatagatatt
tgcatgtcatcggataggtacagactggtagcatctgtcgagaaagctgagaatttttta
aagcttgtgcaaatcaataaagcaaatattcagaaaagctactccgaagaacaaactagt
gcttatcaaactgaagttgatggagagttttttagctgttcattcaagtttctgaaagtt
ggtcaaaacctaaataatagaacggttgtctttcttcatggcttcttgggtacaagtgaa
gagtggatcccaattataaggagtatatcagctagcgtgcattgcatttccattgaccta
cctggccatggggagtcaaagttacaatcactagtggataagagttctaaacaaagattg
gatttatctgttgaatctgttgcaaatatattgctaaagttgatctctggtatcactagt
ggaaaggtcattcttgttggctattcaatgggtgccaggattgcattaaacatggcagtc
aaatacaaagaaaaggtcattggagctgtcataatctcgggaagcccaggattaagaaat
gaaacaaccaaaagaatccgtgttgcccaagatgaagcaaaggcaaactttctagtggaa
catggtttggagtgctttctggatttatggtactctggcatcctatggagaagcttaagg
ggccatcctaacttcagccatattaagagctctcgcagcaggcataaagacatacagggt
cttgcaaatgttctatcgagcttaagcgttgggaagcaattgtctttgtgggatgacttg
aaacacttgcaaacgccactgctcttcatcgtgggagaaaaggatacaaagttccgggag
attgcacagcagatgtgcagtgaaatcaagagaggttccatagctgaccatcaccggcaa
cgaaagctatttgacacaattgtcgtaccagattgtggtcatgctgtacatctagagaat
cctctttgtgtgatcaatgcagtgagaaaatttgtggaaagatgggagcagaaatga
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