Zingiber officinale (ginger): 122017530
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Entry
122017530 CDS
T08725
Name
(RefSeq) transcription factor GAMYB-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122017530
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122017530
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
122017530
NCBI-ProteinID:
XP_042431105
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Position
8B:2059850..2065408
Genome browser
AA seq
549 aa
AA seq
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MNQMQNESGETRIQEDLNDSPSIEEGSSLSSLSGGNRVMKKGPWTTAEDAILLNYVKKYG
EGNWNAVQKHTSLSRCGKSCRLRWANHLRPNLKKGAFTPEEEQLIIELHAKMGNKWARMA
ALMPGRTDNEIKNYWNTRIKRRQRAGLPLYPPNICYQVPEENQQYKNSNEYMFSDKQPND
CFQGSNFEIPDIVLNNFNVNHGSLYNASPFSGIQVNSLLSQSFGPQNCALGNSTSSYMKH
FEKLYPAFPGSISDGHSRFEHMVLEPSGKQLTSILGYPCDPDPRKNLPNFGGAIPGSHAL
LNGIFSVPSPFLGSLDSELPSFQYTETDGSCWPPCSSTLEATDTLGDSPSATISLQSECV
SPRRSGLLEALVHEARTKSNTNKEPSIILNNVAALDLELESVNEIKLESQSNPPISSLSR
SAGVFSSSTSLISAGSVEEFPYPNILSGSGNMIATENFSCHKVGERGTSFKVDFSRPDSI
LGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKPVPVPVGSSSSLMLGVGLDSYQWN
KMPHACQMP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatgcaaaatgagagcggggaaacaagaattcaagaggaccttaatgattca
ccatctattgaagaaggcagcagcttgagttcactaagtggaggaaatcgggttatgaag
aagggaccttggacaactgcagaggatgcaattttgttgaattatgttaagaaatatggt
gaaggaaattggaatgctgttcagaagcacacaagtctctctcgatgtggcaaaagttgt
cgtctacgatgggctaatcatctcaggccaaatttaaagaaaggtgccttcacaccggag
gaggaacaactgataattgaactccatgctaaaatgggaaacaaatgggctcgtatggct
gcacttatgcctggtcgaactgataatgaaataaagaactactggaatacaagaataaaa
agacgccaacgcgctggtttgcctctataccctcctaatatatgctatcaagttccagag
gaaaatcagcaatacaagaattccaatgaatatatgttcagtgacaaacagcccaatgat
tgctttcaaggaagcaattttgaaattcctgatattgtactgaacaacttcaatgttaac
catgggtctctatataatgcttcgcctttctcaggtatacaagttaatagtctactcagt
cagagttttggaccccagaactgtgccttgggaaattcaacatcgagttacatgaagcac
ttcgaaaagctatacccagccttccccggtagtatctctgatgggcattctaggtttgaa
catatggtgctagagccttcgggaaaacaactgacttccatattaggttatccctgtgat
cctgatcctaggaagaacctaccaaattttggaggagcaatccctggtagccatgccctt
ctaaatggcatattctctgttcctagtccttttcttgggtctttggattcggagctccct
tcattccaatatacagaaactgatggtagttgctggcctccatgctcatccactcttgaa
gcaactgatacgttgggtgattctccctcagcaactatttcattgcaatctgagtgtgtt
tcaccaaggcgaagtggtctactggaagcattggttcacgaagcacggacaaaaagtaac
acaaataaagaaccatccatcatactgaacaatgtggctgcactagatctagagctagag
agtgtcaatgagataaagttggaaagccaaagtaatccacctatttcttctttgagtcga
tctgctggtgtcttcagttcgagcacctctctgatcagtgctggttctgttgaggagttt
ccatatcctaacattctttcaggttcaggcaacatgatcgcaactgaaaatttttcttgt
cataaagttggggagagaggcacttcattcaaagtagatttctcaaggccggattctata
ctcggatcagtttggcttgaatatgattcttgtcgtgtgaaggagcacactgtcctgaat
gactcccttgcaacattgctaggtcaagatgtgtgcagcaactacaaacctgtacctgta
cctgttggatcatcatcttctctcatgctgggagttggactcgactcataccagtggaat
aaaatgcctcatgcatgccaaatgccttga
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