Zingiber officinale (ginger): 122018484
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Entry
122018484 CDS
T08725
Name
(RefSeq) heat shock cognate 70 kDa protein 2-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
zof04141
Protein processing in endoplasmic reticulum
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122018484
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122018484
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122018484
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122018484
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122018484
03009 Ribosome biogenesis [BR:
zof03009
]
122018484
03110 Chaperones and folding catalysts [BR:
zof03110
]
122018484
04131 Membrane trafficking [BR:
zof04131
]
122018484
03051 Proteasome [BR:
zof03051
]
122018484
03029 Mitochondrial biogenesis [BR:
zof03029
]
122018484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122018484
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
122018484
Spliceosome [BR:
zof03041
]
Complex B
Other components
Prp19 complex
122018484
Complex C
Prp19-CDC5 complex
122018484
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122018484
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP70 / DNAK
122018484
Membrane trafficking [BR:
zof04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
122018484
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
122018484
Proteasome [BR:
zof03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
122018484
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
122018484
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122018484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
122018484
NCBI-ProteinID:
XP_042431745
LinkDB
All DBs
Position
9A:complement(129676401..129679705)
Genome browser
AA seq
648 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPINTVFDAKRLIGRRFTDSSVQSDVKLWPFKVASGPGDKPMIVVDYKGEQKQFSA
EEISSMILIKMKEIAEAYLGSVVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDISGNPRSLRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYAYNMRNTIKDDKIASQLGAADKKTIEDAIEKAIEWLDANQLAESDEFDD
KMKELEGICNPIIAKMYQGAGADMAGGVDDDGPSAGSSGAGPKIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaagggtgaaggtcctgcgatcgggatcgatctcggcaccacttactcgtgc
gtcggcgtgtggcaacatgatcgggtggagattatcgccaacgatcagggtaatcgaaca
accccctcttatgttgcctttactgactccgaacgccttataggagatgcggccaagaat
caggtcgccatgaaccccatcaataccgtcttcgatgctaaacgtttgattggaaggcgc
ttcaccgacagttctgttcagagtgatgtcaagctctggcctttcaaagttgcttctggc
ccgggtgacaagcccatgattgtggtcgattacaagggagagcaaaaacaattctcagcc
gaagagatttcttccatgatcttgatcaagatgaaagaaattgccgaagcctaccttgga
tctgtcgtcaagaatgccgttgtcactgtccctgcatacttcaatgactcacagcgccag
gccacaaaggatgctggtgtcatctctggtctcaatgtgatgagaattatcaacgagcct
actgccgctgccattgcttatggtcttgacaagaaagcaaccagcgtgggtgagaagaat
gttctcatcttcgatcttggtggtggtacttttgatgtctctcttctcacaatcgaggag
ggtatcttcgaagtcaaagctactgccggtgacactcatctcggaggtgaggattttgac
aatcgcatggtgaaccacttcgtccaggagttcaagaggaagaacaagaaagacatcagt
ggaaaccccaggtcacttaggagattgaggactgcttgcgagagggcaaagaggaccctc
tcctcaaccgcacaaaccaccattgaaattgattctttgtacgagggcattgatttctac
tccacgatcacgagagctaggtttgaggagctgaacatggaccttttcaggaagtgtatg
gagcccgtcgagaagtgtttgcgcgatgccaagatggataagagctctgttcacgacgtg
gttctcgtcggcggatccaccagaattccaaaggtgcagcagttgttgcaggacttcttt
aacggtaaggaactctgcaagagtatcaaccccgatgaggccgtggcttatggtgctgct
gtccaggctgctattcttagcggcgagggtaatgagaaagtccaggacctgctcctgctc
gatgtcactcctctttcgcttggtttggagactgctggaggtgtcatgactgtcttaatc
ccccgaaataccaccatcccaaccaagaaagagcaagtcttctcgacctattctgacaac
caacctggcgtcttgattcaggtttatgagggtgagaggactaggaccagagataacaat
ctgctcggtaagtttgagctctcaggaatcccccctgctcctcgtggcgttccccaaatc
actgtttgctttgatatcgacgcaaacggtatcctgaatgtctctgccgaggataagacg
actggacagaagaacaagatcaccatcaccaacgacaagggcaggcttagcaaggaagag
attgaaaagatggttcaagaagccgagaagtacaagtctgaggatgaggagcacaagaag
aaagtggaagccaagaatgcgctcgagaactacgcctacaacatgaggaacaccatcaag
gacgacaagatcgcatctcagcttggcgcggccgacaagaagacgatcgaggatgcgatt
gagaaggccatcgagtggctcgacgccaaccagttggctgaatcggacgaatttgatgac
aaaatgaaggagctggagggcatttgtaatcccatcattgctaaaatgtaccaaggtgct
ggggctgacatggctggcggagtcgacgatgatgggccttcggctggctcaagtggtgcg
gggccgaagattgaggaggtagactaa
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