Zingiber officinale (ginger): 122018799
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Entry
122018799 CDS
T08725
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122018799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122018799
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122018799
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
TniB
IQ
Motif
Other DBs
NCBI-GeneID:
122018799
NCBI-ProteinID:
XP_042432146
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Position
9A:131174327..131183116
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AA seq
724 aa
AA seq
DB search
MFDGGHKAQYMDGQREKFVRLEESSPALSFSSDTDRRNRSTFNVEGFGQGSHTSFKFIRG
GVRKGSEGLKFLGRSLRFGASREVFPEDLKVSEKKIFDPQDKFLIIMNRLFVISCILAVA
VDPLFYYLPIKDENCLGIDRKLAVASTTLRTIIDCFYLIRMALQFRTGYIAPSTRVFGRG
ELVIDPAQIAKHYLRSNFIIDFLSVLPLPQIVVWRFLHRNKGSDVLATKNALFVIVLLQY
IPRLFRIIPLTSELKRTAGVFAETAWAGAAYYLLWFMLACHVVGSFWYLLSVEREDDCWQ
SACKQQNDTCITNYLYCGNEDLDGFLKWNASFILERCNADDSNNAFFQFGIYEQALTSGI
VASNHFISKIAYCFWWGLQNVSTLGQGLQTSTYLGEVIFSIIIAVLGLVLFALLIGNMQT
YLQSMTIRLEEMRVKRRDSEQWMHHRMLPPDLRQRVRRYDQYKWLETRGVDEEGLVQSLP
KDLRRDIKRHLCLALVRRVPLFEKLDERLLDAICEGLKPSLYTENTYILREGDPVDEMLF
IIRGSLESITTDGGRSGFFNRTLLQERDFCGEELLTWALDPKSGGNLPTSTRTVRALNEV
ETFSLNADELKFVASQFRRLHSRQVQHTFRFYSQQWRMWAACFIQAAWRRYVKRKMAELL
QKEEEERRRNNLVKGTTSLGAAIYASRFAANAMRGVHRLRNRRALGLVRLQKPPEPDFTA
EGAD
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacggtggacataaagctcaatatatggacggtcaaagagaaaagtttgtgagg
cttgaagagtcaagtcctgcgttgtcattttcctcggatacggatagaaggaatagaagc
acattcaatgttgagggatttggtcaaggatcacacacctcattcaaattcataagggga
ggagtgagaaagggatctgagggtcttaagtttcttggcaggtcacttagatttggtgct
tctagggaagtttttcctgaagacctcaaggtttctgagaagaagatttttgatcctcaa
gataaatttctgattataatgaacaggctttttgtcatatcatgtattcttgcagtagca
gtggatcctttgttttattatcttcctataaaagatgaaaattgcctaggaatagatcgg
aagttagctgttgcatctactaccttgcggacgatcattgattgtttctatcttattcgt
atggctcttcaatttcgtactggttacattgccccatcaacccgagtgtttggcagaggt
gaacttgtaattgatccagcacagatagcaaaacattacttgagaagcaacttcattatt
gacttcctgtctgtcctaccactcccacagattgtagtttggaggtttcttcatagaaat
aaaggatcagatgtactggctacaaaaaatgcattgtttgttattgttctgcttcagtat
atccctagattattccgcattattcctttaacatcagagttgaaaaggactgctggtgtc
tttgctgaaactgcttgggctggtgctgcatattatttattgtggttcatgctagcttgc
catgttgttggttctttctggtacttgttgtctgttgagcgagaagatgattgttggcag
tcagcttgtaagcaacagaatgacacgtgcatcacaaattacttatattgcggcaatgaa
gatcttgatggttttctcaagtggaatgccagctttattctggagcgatgtaatgctgat
gatagcaataatgcttttttccaatttggaatctatgagcaggctttgacttcgggtatt
gtggcatctaaccatttcatttccaaaattgcttactgcttctggtggggattgcagaat
gtaagtacgctaggccaagggctgcaaacaagcacttatcttggggaggtgatcttctca
atcatcatcgctgttcttggacttgtactgtttgccctccttatcggtaacatgcagaca
tatcttcaatcgatgacgatacggctcgaagagatgcgagttaagaggcgtgactcagaa
cagtggatgcatcaccgtatgctaccaccagacctcagacagcgtgtccgtcgatatgat
cagtacaagtggttggagacgagaggtgtggatgaagaaggtttggttcagagccttccc
aaggatcttcggcgggatatcaagcgtcatctttgtttagccttggttaggagggttcct
ttatttgagaagttggatgagcgtttgctagatgcaatttgtgaaggactcaaacctagt
ctgtacacagagaacacatacattctgagagagggggatcccgtggacgaaatgctcttc
atcattcgtgggagcttggagagcataactactgatggaggaagaagcgggttcttcaac
cgaactcttcttcaagagcgtgatttctgcggtgaggagctcttgacttgggcactagat
ccaaagtccggtggcaacctaccaacttccacgaggaccgtgagagcactgaatgaagtt
gaaacattctcactgaatgctgatgaactcaagttcgtggcgagccagttcagacgtctc
cacagccggcaagtccagcatacatttcgattctactcacagcaatggaggatgtgggca
gcttgcttcatccaagccgcgtggagacgctatgtcaagcggaagatggccgagcttctg
cagaaggaagaagaagaaagacggagaaataacttggtgaaaggcaccacaagccttggt
gcggccatctacgcatcgagattcgctgccaacgcgatgcgaggtgttcatcggcttcgg
aacaggagggcccttggattggtgaggttgcaaaaaccacccgagcctgatttcactgca
gaaggtgctgattga
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