Zingiber officinale (ginger): 122018825
Help
Entry
122018825 CDS
T08725
Name
(RefSeq) transcription elongation factor TFIIS-like isoform X1
KO
K03145
transcription elongation factor S-II
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122018825
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122018825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
122018825
NCBI-ProteinID:
XP_042432191
LinkDB
All DBs
Position
1A:11453448..11457461
Genome browser
AA seq
390 aa
AA seq
DB search
MEEELSETFEAAKKAAEQVQTGGECTEVERCVSALRRLKKMPVTTKDLVATQVGKKLRLL
TKHSHDEIRTVANDLFQFWKKLVVQEASKDNKKSEASEGKNIPKVEKDTERAMKLNADRI
PKAASTESNIVSKFECVEAGRVDCDGEKQNSRMCKQGSGKLENTNSSKFGHTNTGESNKR
DGFSTDESAEYISKKPRLGSGSLKLSSMVKCNNPARDKIRELIAEAFARVSKETAESKLD
EVRNILDEVDASDPIRVAVSMESALFEKLGLSTGSQKHKYRSIMFNLRDNNNKDFRRRVL
LGLVKPQDIVTLAPEDMASDERKQVNKQIKEKALFECERGSAPKATTDQFKCGRCGQRKT
TYYQLQTRSADEPMTTFVTCVNCNNHWKFC
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagctctcggagacgttcgaggctgcaaaaaaggcggcggagcaggtccag
accggcggggagtgcacggaggttgaacgatgtgtcagtgcgcttcggaggctgaagaag
atgccggtgaccacgaaggatttggtggccactcaggttggcaaaaaacttcgccttctg
acaaaacattcccatgatgagattcggactgtggcaaatgatttatttcagttctggaag
aaactagtggttcaggaggcatcaaaagataataagaaatctgaagcctcggagggaaaa
aatattccaaaggttgaaaaggacactgagcgagcaatgaaacttaatgcggacaggatt
ccaaaagctgcatcaacagagagcaacattgtttcaaaatttgaatgtgttgaagctggt
agggtagactgtgacggggaaaaacagaatagcagaatgtgcaaacaaggatctggcaaa
ttagagaataccaattctagtaaatttgggcacacaaacactggagaatcaaacaagagg
gatggtttctccacggatgagagtgcagaatatatttcaaagaaacctcgattaggcagt
ggctcattgaagctgtcttcaatggtaaagtgtaacaatcctgcacgtgataagatccga
gagcttattgcagaagcctttgcgcgagtttctaaggaaacagctgagagcaaattagat
gaagtgaggaacatcctggatgaagttgatgcatctgaccctattcgtgtagctgtgtct
atggaatctgctttatttgagaagttaggcctctcaactggttctcaaaaacacaaatac
aggtctataatgttcaatttgagggacaacaataacaaagacttccgacgaagagtcctc
cttggtcttgtaaagccacaggacatagttactttggctccagaagacatggctagcgac
gagaggaaacaggtgaataaacagataaaagagaaggccttgtttgaatgtgaaagagga
tcagctcctaaagcaacgactgatcagttcaaatgcgggcggtgtgggcaaaggaagacc
acatactatcaattgcaaacacgttccgctgatgaaccaatgactacttttgtaacttgt
gtaaactgcaacaaccattggaagttctgttaa
DBGET
integrated database retrieval system
