Zingiber officinale (ginger): 122018919
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Entry
122018919 CDS
T08725
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 4-like isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122018919
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122018919
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
122018919
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122018919
NCBI-ProteinID:
XP_042432326
LinkDB
All DBs
Position
1A:11561035..11567772
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AA seq
546 aa
AA seq
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MVLICRCVSDVVADLDIYIFFPVWELMADEVRARKALPPGSRTFGAGGWRRTATRTWILR
LGSSILIWTALMQLTSVWHPRPPKSSPAACFDGRGAATAGNGGRDLNGSTNLSVLDGEEH
ALFGSRSSPPALLPRRLYKSNGYLKVSCNGGLNQMRAAICDMVTIARYLNLTLVVPELDK
ISFWADPSDFGDIFNVDHFINSLRDEVKIVRALPKKFSKKIHTEPFSMPPVSWSSLKYYS
KEILPLVRKHKVVHFNRTDARLANNGLPLHLQKLRCRVNYKALRFTPAIEALGNKLVSTL
QRSGFFVVLHLRYEMDMLSFSGCTHGCSAKETEDLTRMRYAYPWWKEKEIISEKKRSEGL
CPLTPEETAVVLRALGFTRDTLIYIASGEIYGGERRMASLRAAYPRIVRKEMLLSAEELN
PFQNHSTQMAALDYQVSVASDVFVPTYDGNMAKVVEGHRRYNGFRKTIVLDRRELVKLLD
LLQDGNVSWDQFSTAVMELHKGRMGQPTLRMVLHGRPKEEDYFYSNPHECTGSSRIRHTE
SREFDI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggtcttaatttgtcgttgtgtttccgatgtagtcgctgatttggatatatatattttt
ttccctgtttgggagctaatggcggacgaggttagggcgaggaaggcgttgcctccggga
agcaggacttttggtgcgggcgggtggcggcgcacggcgacgaggacgtggatcctgcgg
ttggggtccagtatcctcatatggacggcgctgatgcagctgacttcggtgtggcatccg
cgtccccccaaatcgtcgcctgccgcttgcttcgacggccgcggtgccgcaactgctggc
aacggcggcagagatctcaatggttccacgaatctttccgtgcttgatggcgaagaacac
gcgctgttcgggtcccgctcctccccgcccgctcttcttcctcggagactttacaaaagc
aatggttatcttaaggtgtcatgcaatggaggcctgaatcagatgcgtgctgcgatatgt
gatatggttactatagcacgctatctcaatctaacgcttgtagttcctgaacttgataaa
atatctttctgggctgatcctagtgattttggtgatatattcaatgtagatcactttatt
aattctttgagagatgaagtgaagatagtaagagcgctccctaaaaagtttagcaaaaag
atccacactgaaccattctcaatgcctcctgttagctggtctagtttgaaatactactcg
aaggagattctcccgcttgtgaggaagcacaaggtagttcattttaacagaacagatgct
cgtcttgcaaataatggattgccgttacacctccaaaaactccgttgtcgtgttaattac
aaggccttaagatttacgcctgcaattgaagccctaggcaataaacttgtctcaactctc
cagagaagtggattcttcgttgttcttcacctgcgatatgagatggatatgctctctttc
tctggttgcacacatggatgctctgcaaaagagactgaagatctcactaggatgagatat
gcctatccatggtggaaagagaaagaaataatatcagaaaagaaaagatcagaaggtttg
tgccctcttacacctgaagaaacagctgtagttttacgagcactaggtttcacaagggac
accctaatttacattgcctctggtgaaatctatggtggggaaagaaggatggcttctttg
agggctgcatatccgagaatagtgaggaaagaaatgcttcttagtgctgaggaattgaac
cctttccaaaaccactcaactcaaatggcagcattggactatcaggtttctgttgcaagt
gatgtctttgtccctacctatgatggaaatatggccaaagtagtagaggggcaccgcagg
tataatggttttcgtaagacaatcgtgttggataggagagaacttgtaaaacttttggat
cttctccaggatgggaatgtatcctgggatcagttctcgactgctgttatggaattgcac
aagggccgcatgggccaaccaacattaaggatggtcctgcatggtcgaccaaaagaagag
gactatttctattctaatcctcacgagtgtactggctcttcaaggatcagacatactgag
tcgagagaatttgacatctaa
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