Zingiber officinale (ginger): 122018965
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Entry
122018965 CDS
T08725
Name
(RefSeq) CCAAT/enhancer-binding protein zeta
KO
K14832
ribosome biogenesis protein MAK21
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122018965
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122018965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBF
Adaptin_N
AAA_22
Cnd1
Motif
Other DBs
NCBI-GeneID:
122018965
NCBI-ProteinID:
XP_042432391
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All DBs
Position
9A:complement(133597545..133617289)
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AA seq
1039 aa
AA seq
DB search
MAASKAQKSDELDALKSDVASFAASLGLAPPTATSSYGFDDSDFRKSGPIKPSKSQDSKS
PSSAADLGAEVTAKKKSGSKLVPKPHPLQLDSFNKSYQGERGPHLTLMKASALSGRWYDD
ADELEAKVLGPDGSKKVTALGIEEFKKLVEKKKELAVKLMAQYTKDYDSSRRKTGDMKLL
EVTARSGTSADKVSAFTCLVEDNPIANLRAFDSLLSMVTSKVGKRYAFTGFEALKELFLL
RMLPDRKLKSLYQRPLDCLPETKDGFSLLLFWYWEECLKQRYERFVTVLEEAIKDMLPNL
KDKAMKTVFILLKSKPEQERKLLTALVNKLGDPDRKAASGALYHLSCLLSAHPNMTAVVI
DEVDSLIFRPSIGLRAKYQAVNFLSQIFLSKKGDGPKVARRLIDIYFALFKVLISEAKDG
KSSKNEKKSGLDAKGKRKSGKSGSLKTLKKNNDDEASESNIEMDSRLLSVLLTGVNRAFP
FVASDDAESIIEDQTPVLFRLVHSKNFNVGVQALMLLYQISSKNQIVSDRFYRALYAKLL
TPAAVSSSKPEMFLGLLFKAMKNDLNMKRVAAFSKRLLQVALQRPPHYACGCLFMMSELL
KAKPPLWGTVLQTETVDDDIEHFNDIIEDPEDIIMEQSSKLIKSGASAVSQNNKKRQEYE
DDDSEAETSLKDVSKINAVGKQQSVDNQPLNPGPGLILPAGYNPRHREPIYCNAGCASWW
ELTILASHVHPSVATMSRTLLSGATIVYNGDPLNDLSLTSFIDKFMEKKPKPNRKTEGSW
YGGSKIAPARKIDVNSHLIGDEILQLAEDEVAPEDVVFHRFYMNKSKSSKKKPKAKKASN
NAEDVDDLLLDADSSTDDEEIDNIMGSGNLPVENADGDFDYDDLDRIAGEDDEELLGNDS
DAELDPSDNRSSRENGSDDEDDNHFSDDSLDILSDGSEDGGDKLQDYGSDGSEDGGDKLQ
DYGSDGSDDVDADNDVDDHHHRKGSKEIKKVAKGEKRKSHGKSRASPFASLEEYEHLLSE
KDNNSKQKSLRKKRKKLSS
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctaaggcgcagaagtccgacgaactcgatgccctcaagtccgacgtcgcc
tctttcgctgcttctcttgggcttgctcctcccacagctacctcctcctatggcttcgac
gactccgatttccggaaatccgggccaatcaagccctccaagtcccaggattccaaatcc
ccatcgtcggccgccgacctcggtgcagaggtcaccgcaaagaagaaatccggttccaag
ctcgtccctaagccacatccgctgcagctcgattcattcaacaagagctatcagggcgag
cgcggaccgcacttgaccttgatgaaagcgagtgctctgtcggggcgttggtacgacgac
gctgatgaattggaggccaaggtcttgggacctgatgggagtaaaaaggtgacggctttg
ggaattgaggagtttaagaagctggtcgagaagaaaaaggagctggccgtcaagctaatg
gcccaatacaccaaggattatgattcctcgaggaggaagactggggatatgaagttgctg
gaggtgacagcaaggtcagggacgtcagcagataaagtctcagctttcacttgcttggtc
gaggataaccccatcgcaaatcttagggcattcgattcccttttgtctatggtgacatcc
aaggtagggaaacgctatgcatttactggctttgaagcactgaaggagttgttcctattg
agaatgttgcctgatcgcaagttgaaatctctatatcaacgtccccttgattgtttgcct
gaaacaaaagatggtttctccctcttacttttttggtattgggaggaatgcctaaagcaa
aggtatgaacggtttgtaactgtacttgaggaagcaataaaggacatgctaccaaatctt
aaagacaaggcaatgaagacagtgttcattctcttgaagagcaaaccggaacaagaacga
aaactgcttacagctcttgtaaataaacttggggatccagacaggaaagcagcatctggg
gctttgtaccacttgtcttgccttttgtctgcacatcctaacatgacggcagtggtgatt
gatgaagtggattccttaatcttcagaccatctattggactacgtgcaaaatatcaagct
gttaatttcttaagtcagatttttctcagcaaaaaaggggatggacctaaagttgctaga
cggttgattgatatatattttgcgctttttaaggtactaatttcagaggcaaaagatggc
aagagcagcaagaatgaaaaaaaaagtggtttagatgcaaagggaaagcgcaaaagcgga
aaaagtggttcactgaaaacactcaagaagaataatgatgatgaggcttcagagtccaat
attgagatggattcccgtcttctatctgtactgcttactggggtaaatagagcatttcca
tttgttgcaagtgatgatgctgaaagcatcattgaggatcaaacacctgtactatttaga
ttggtccattctaagaattttaatgtgggtgttcaggcactgatgttgttatatcagata
tcttctaagaatcagattgttagtgaccggttctatcgggctctctatgcaaagttactc
actcctgctgcagtgagttcatcaaagcctgaaatgttccttgggctattgttcaaagca
atgaagaatgacttgaacatgaagcgtgtagcggctttttcgaagcgacttctgcaggtt
gcacttcaaaggcctccacattatgcctgtggatgcttgtttatgatgtctgagcttcta
aaggcgaaaccacctttgtggggtactgtcttacaaactgagactgttgatgatgatata
gagcacttcaatgacataatagaagatcctgaagatattatcatggagcagtcttctaaa
ttaataaaatcgggtgcttctgctgtgtcacaaaataataaaaaacgacaagagtacgag
gatgatgactctgaagctgaaactagtttgaaagatgtttcaaaaatcaatgcagtggga
aagcaacagagcgttgataatcaaccacttaatccaggtccagggttgatacttcctgca
ggctacaatccacggcatagagaaccaatttactgcaatgcaggctgtgcgagttggtgg
gagctgacaatattggcttctcatgtgcacccatcagtggcaacgatgtctagaactctg
ttatcaggtgcaaccattgtttacaatggagatcctctgaatgatttatctcttacttca
tttatcgacaagtttatggagaagaaaccaaagcccaatcgaaaaactgaaggtagctgg
tatggtggctccaaaattgcaccggctagaaagattgatgtgaacagtcatctcattggt
gatgagattctacagctagcagaagacgaagtggcccctgaagatgttgttttccacaga
ttctacatgaataaatcaaagtcatccaagaagaagcctaaggcgaaaaaagcttcaaat
aacgcagaggatgtagacgatctcttgttggatgcagacagcagcactgatgatgaggag
attgataatatcatgggttctgggaatcttccagtggaaaatgctgatggagattttgac
tatgatgatttggacagaattgcaggtgaggatgatgaggaattgcttggaaatgacagc
gatgcagaattagatccttcagacaatcgtagttcacgtgaaaatggcagtgatgatgaa
gatgataatcatttcagcgatgacagtcttgatattttaagtgatggttccgaagacggt
ggagataagcttcaggattatggtagtgatggttctgaagatggtggagataagcttcag
gattatggtagcgatggttctgatgacgttgacgctgataatgatgttgatgatcatcat
catcgtaaaggatctaaggaaatcaaaaaagttgccaagggagagaaaagaaagtcacat
gggaagtctcgagcatcaccatttgctagtcttgaagaatatgagcaccttttaagcgaa
aaagacaataacagtaagcagaaatcacttaggaagaaaaggaagaaactatctagttga
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