Zingiber officinale (ginger): 122018967
Help
Entry
122018967 CDS
T08725
Name
(RefSeq) protein NPGR2-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122018967
Membrane trafficking [BR:
zof04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
122018967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_16
TPR_8
TPR_17
TPR_12
TPR_CcmH_CycH
ARM_TT21_C
TPR_11
TPR_EMC2
TPR_1
TTC7_N
ARM_TT21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
122018967
NCBI-ProteinID:
XP_042432392
LinkDB
All DBs
Position
9A:60194835..60205717
Genome browser
AA seq
722 aa
AA seq
DB search
MKRRGSFSVLMRNTMNCLCSGEQMQVNEMTQSTEFLSTKDVSVDQYTQQNSEIEQRVDIG
NIEEAESSLREGLCLNYEEARALLGRLEYQRGNVEAALRVFDGIDLASVAPKIRSTINKR
MEHHKNHTNWDARPMSIHAVGLLLEAVYLKARALQDLGRFKEAAQSCNIVLDTLESALTD
GSVGNFLTDSKLQEIVRRAVELLPELWKLAGFSHEVILSYRRALLGHWNLDAVTTAKIQK
EFAIFLLYGGFDASPPNLRFQMDGAFIPRNNIEEAVLLLTILLRKFSLKRIEWDPSILHH
LTFALAISGQLGSLANQVEELLPGALDRKTQYYTLALCYLGENDDLTALNLLRKLLSASE
DPNCVKALLLASKVCGENISCAEDGVMFARRALTNLHGCCGQIESLANCLLGISLSTQAR
SSSSDSERVLRQSEAIYSLEKAEKVVPGKDYRILYNLSLENAEQRKLDSALRYAKQLMQL
EAGSNIEGWILLARILSAQKRFVDAETIINAALEQTGKWNHGVLLRTKAKIQIAQGQLKN
AIETYTHLLAVIQLKTKSFGFGLATLKGGKIDRSLELQTWYDLTNVYISMSQWRDAEVCL
KNFKAINPYSALAWHATGQLYEAKGLLKEAQGAYAKALDIEPGHVPSLVSTAIVLRDLND
TSLAVIKGFLTDALRLDHANHIAWFNLGLIYKAENPRLALEASECFQAATLLEETAPVEP
FR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggagaggttccttctctgtccttatgaggaacacaatgaactgcttgtgttct
ggtgaacaaatgcaagtcaacgaaatgacccaatcaactgagttcttgtccacaaaggat
gtctcggtagaccaatatactcaacaaaatagtgagattgaacaaagggttgacattgga
aacattgaagaagcggagtcatctcttcgtgaaggtctctgcttgaattatgaggaagca
agagccttgcttggcaggctggagtatcaaagaggaaatgtagaagctgcacttcgtgtt
tttgatggcatagatcttgcttcagtggctcctaagataaggtccacgataaataaaaga
atggaacaccacaagaatcatacaaactgggatgctcggccaatgtccatacatgcagtt
ggcttacttcttgaagcagtgtatttaaaagcaagagcattgcaagatctgggaaggttt
aaagaagctgctcaatcatgcaacattgtcctggacactttagagtctgctttaactgat
ggctctgtggggaactttcttactgatagtaagttacaggagatagtacgcagggcggtt
gagttacttccagagctatggaaactggctgggttttcccatgaggtcatcttatcttac
cggagagcccttcttggacactggaatcttgatgctgtcaccacagcaaagatacaaaag
gaatttgctatttttcttctttatggaggctttgatgcaagcccccctaaccttcgtttt
caaatggatggcgcttttattcctaggaacaatatagaagaggctgttcttctgttaact
attctactgagaaagttttctctgaagagaattgaatgggacccatctattcttcatcat
ctgacttttgcgctagccatatcagggcagttaggttcactggccaatcaggtagaagaa
ttactacctggtgccctagataggaaaacccaatactatactcttgctttgtgttatttg
ggggaaaatgatgatcttactgctttgaatctactgagaaagctactgagtgcttcagag
gatccaaattgtgtgaaagcattgttacttgcttctaaagtttgtggtgagaatatttcg
tgtgcagaagatggtgttatgtttgcacgcagggctctcaccaacttgcatggttgctgt
ggccaaattgaaagtctagctaattgtttacttggaatttctctttcaactcaggctagg
tcttctagttctgactcagagagggttttaaggcagtctgaggcaatttactcgcttgaa
aaagctgaaaaagtggtccctgggaaagattataggatcttatataatctaagcttggaa
aatgctgaacaaagaaagttggattcagctcttcgttatgccaaacagctcatgcaactt
gaagctggatcaaatattgaaggatggattcttttagctcgaatattgtctgcacagaag
cggtttgttgatgctgaaactattattaatgctgctttggaacaaacaggaaaatggaat
cacggggtattgttgaggactaaagctaaaattcaaatcgcacaagggcaattgaagaat
gcaattgagacatatactcatcttcttgcagtaattcagttgaagactaaaagttttggc
tttggactagcaactttgaagggtggaaaaattgatagaagtttggaacttcagacttgg
tatgatcttactaatgtctacataagcatgtcacaatggagggatgctgaagtttgctta
aaaaatttcaaagctattaatccttattctgctttagcatggcatgcaacaggacagtta
tatgaagcaaagggcctccttaaagaagctcaaggagcatatgctaaagccttggacata
gaaccaggccatgtccctagcttggtctccactgcgattgtccttagagatctaaatgac
acttcattggccgtcatcaaaggcttcctcactgatgcacttcgacttgaccacgctaac
catattgcttggttcaatcttggtctaatttataaagctgaaaatccaaggttggcactt
gaagcttctgagtgttttcaggctgccactctccttgaagagactgcaccagttgaacct
ttcagatga
DBGET
integrated database retrieval system
