KEGG   Zingiber officinale (ginger): 122018976
Entry
122018976         CDS       T08725                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein alr3466-like isoform X1
  KO
K24725  angio-associated migratory cell protein
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:zof04990]
    122018976
Domain-containing proteins not elsewhere classified [BR:zof04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   122018976
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 RT_RNaseH Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR90_POC16_2nd RT_RNaseH_2 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 PEP5_VPS11_N WDR54 PROPPIN Ge1_WD40 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_WDR35_TULP_N TRADD-like_N PQQ_2 KNTC1_N
Other DBs
NCBI-GeneID: 122018976
NCBI-ProteinID: XP_042432411
LinkDB
Position
9A:26763857..26783670
AA seq 461 aa
MSIHGDGAGDYESDEEGEVFLDEDDIIQEIAIDEEDLPDRDEEVGSDGGMVEEADDSVFV
FRGHSDEIYTVSCSPTDASLVATGGKDDRGFFWKIGSVDASLELRGAVLMQEKRPIAYFS
EKLNGAALNYSTYDKELYALVRALETWQHYLWSKEFIIHTDHESLKHLKGQGHQDTVSTV
AFSFDGQLLATGSFDGHVHIWDTSSGSLKFTLEGSGEGFEWLKWHPRGHLLIAGSEDANV
WMWNADKGVCLNTFSGHGSTVTCGDFTPDGKIICTGSDDASLRIWNPKTGECFHVVKGHP
YHTDGLTCLSITSDSTIAITGAKDGSVHLVNITIGRVISSLSSHTASVECIGLKPNALWA
TTGGMDLKLIIWDLQSSSVRCTCDHEEGVTSLTWLGTSQYVASGCVDGKVRIWDSLSGGC
VRTFSGHADTIQSLAISADGNSLVSVSDDGTARVFSISEFK
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgagcatccatggagacggcgccggcgactacgagtctgacgaagaaggagaggtgttc
ttggacgaggatgatatcatccaggagatcgccattgacgaggaagatcttcccgaccgg
gatgaagaggtgggctcggacggtggtatggtggaagaagctgatgattctgtgtttgtc
ttcaggggccattcagacgaaatatatactgtttcatgcagtccaacagatgcatctctt
gttgctactggaggtaaagatgatagaggatttttctggaaaattggttcagtggatgcc
agtctagagctccgaggtgctgttcttatgcaagaaaagaggccaattgcctacttcagt
gagaaactcaatggtgcagcgttgaactactcaacatatgacaaggagctctatgcattg
gtgcgagctttggagacatggcaacattacttgtggtccaaggagttcattattcacacg
gaccatgagtcactaaagcatttgaaaggccaaggtcatcaagatactgtttctactgtg
gccttcagttttgatggacaattacttgcaactggaagctttgatgggcatgttcatata
tgggacactagttcaggtagtcttaagtttacacttgaaggttctggagaaggctttgag
tggcttaagtggcacccaagagggcacttgctaatagctggttcagaagatgcaaatgtg
tggatgtggaatgctgacaaaggtgtctgtctcaatacattttctggtcatggaagcact
gtcacgtgtggtgatttcactcctgatggtaagatcatttgtactggttctgatgatgca
tcactgaggatatggaaccctaagactggagagtgtttccatgttgttaaagggcatcca
taccacactgatggattgacatgcttatcaataacctctgattctactattgcaatcacg
ggcgcaaaggatggctctgttcacttggtgaacataacaattggacgggtaatcagctca
ttaagttctcacacggcctctgtggagtgcattgggcttaaaccaaatgcactttgggcg
acaacaggtgggatggatctgaagctcattatatgggatctgcaaagctcttcagtgcga
tgcacgtgtgatcacgaggaaggagtgacgagcctcacatggttgggcacatctcagtat
gttgcatctggttgtgtcgatggaaaggtgcgaatctgggacagtctttcaggtggctgt
gtcagaaccttcagtggccacgcagataccatccaatctcttgctatttctgccgacggg
aactccctcgtctcggtttcagacgatggcacagcccgtgttttctcaatctcagagttc
aaatag

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