Zingiber officinale (ginger): 122018980
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Entry
122018980 CDS
T08725
Name
(RefSeq) alpha-humulene synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
122018980
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
122018980
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
DUF5769
Motif
Other DBs
NCBI-GeneID:
122018980
NCBI-ProteinID:
XP_042432452
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Position
1B:166718404..166721272
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AA seq
541 aa
AA seq
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MERQSMVRKSAEYHPTVWGDYFIRNYSCLPIEEEKEYMIKRVEELKDGVRNLFEETHDGL
QIMILVDSIQLLGLDYHFDKEITAALRLIYEADVENYGLYEVSLRFRLLRQHGYTSSPDV
FNKFKDDKGRFLSALNGDAKGLLGLYNAAYLGTHEETILDEAISFTKCQLESLLGELEQP
LASEVSLSLETPLCRRIRRLLARKYIPIYQENVMRNDTLLELAKLDFNLLQSLHKEEVKK
ISIWWNDLALVRSLKFARDRVVECYYWIVAVYFEPQYSRARLITSKVISLMSIMDDIYDN
YSTLGESRLLTEAIERWEPQAVDQLPEYLKDFYLKLLKTCKDFEDELEAHEKYRIPYLQE
AIKVLSRSYFHEAKWGAEGYVPSLEEHLRVSLKSTGYPTVTCASFVGLGEDATKEAFEWV
ASFPKILKSCTIITRLMDDITSHELEQERDHVASTVESYMKEYGTNAKVAREKLQVMVEQ
GWKDLNKECLGTTPVARSLIEIILNLSRAMEDIYKYEDTYTNSNTRMKDNVSLILVESFP
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcagtcgatggttcgtaagtcagctgaatatcaccctactgtttggggtgac
tatttcatccggaactactcttgtttgcccatcgaagaagaaaaggagtacatgataaag
agggtggaagagttaaaagatggagtgagaaacctattcgaagaaacacatgacggattg
caaattatgattttggttgattcgattcaacttcttggattggattatcattttgataaa
gaaataactgcggcactaagattgatttacgaagctgatgttgagaattacgggctttat
gaagtttctcttcgatttagattgcttaggcaacatggatatacttcgtctccagatgtt
tttaacaagttcaaagatgataaaggaagatttctgtcggccttgaatggagatgcaaag
ggactactaggcttatacaacgcggcttatctcggaacacatgaagagacgattctcgac
gaagctatttcttttacaaagtgtcaacttgaatctttgttgggtgaacttgagcagcct
ttagcatcagaggtgtctctttcccttgaaacgccactatgtcgaagaattagaaggctc
ttggcgagaaaatatatacccatttatcaagagaatgtgatgcgaaatgatactctatta
gaacttgcgaagttggatttcaatctactacaatcccttcataaagaggaagtgaagaaa
atttcaatatggtggaatgatttagcactggttaggtctctaaaatttgctcgtgatcga
gtggtggaatgttattattggatagttgcggtgtattttgaacctcaatactctcgtgca
cgattaattacttccaaggttatttcccttatgtcaattatggatgacatctatgataac
tacagcacattgggagagagtcgactgttaaccgaggcaattgaaaggtgggaacctcaa
gctgttgatcagttaccagaatacttgaaagatttttatctcaaactactaaagacttgc
aaagattttgaagacgaattggaagcccatgagaaatatcgcataccatatcttcaagag
gcaataaaagttctatcaagatcttatttccatgaagcaaaatggggtgcggaaggatat
gtgccatcactcgaggagcatctgcgtgtttcattgaaatcgaccgggtatcctactgtt
acatgtgcctctttcgtaggtctaggagaagatgcaacaaaagaagcatttgaatgggtt
gctagtttccccaagatccttaaatcatgcactataattactagacttatggatgatata
acttcacacgagctggagcaagaaagagatcatgtcgcttcaacagttgagagttacatg
aaagaatatggtacgaatgcaaaagtggcacgcgagaagttgcaagtgatggtggagcaa
ggatggaaggatttgaacaaggaatgcctcggtacgacaccggtagctcgatctttaatt
gaaataatactgaatctttcacgagccatggaagatatatacaagtacgaggatacctat
accaattccaacactaggatgaaagataatgtctctcttatattggttgaatcctttcct
atttga
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