Zingiber officinale (ginger): 122019056
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Entry
122019056 CDS
T08725
Name
(RefSeq) ABC transporter B family member 10-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122019056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122019056
04147 Exosome [BR:
zof04147
]
122019056
04090 CD molecules [BR:
zof04090
]
122019056
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122019056
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122019056
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122019056
CD molecules [BR:
zof04090
]
Proteins
122019056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
RsgA_GTPase
AAA_30
AAA_21
AAA_25
Zeta_toxin
nSTAND1
TrkA_N
Motif
Other DBs
NCBI-GeneID:
122019056
NCBI-ProteinID:
XP_042432498
LinkDB
All DBs
Position
9A:15508019..15513729
Genome browser
AA seq
1310 aa
AA seq
DB search
MNHENDLRWIPCSRPLLTLKFGDHRHLTTITTVVAIVGNRHKEMDEVELEKKEKKAVQSK
PVSFGRLLSYADTVDWVLMGLGTVGSVVHGMAQPIGYLLLGKALEAFGSNIGDQEATVRA
LEKVIPFVWYMAIATLPAGLLEISCWMYTSERQLARMRLAFIDSILHQDIEAFDTELTTA
KVIACVTSHMSIIQDAIGEKLGHFISCFSTYFAGVVIALACCWEVALLSLMVVPMILAIG
ATYTKKMNSLSSLRTMYLSEATSIVEQTLSHIGTVFSFVGESSSIKSFTENIRQQYIISK
KEAGIKGLSLGLFQTVTFCSWALVVWIGAVVVVARRANGGETLAAIMSILFGAISITHAA
PDFQIFNAARATGTEIFQVIERKPRISSEKKGVTLEKFVGVIELDRVSFAYPSRPNKLIL
KDFSLCMAAGKVYALVGSSGCGKSTILSLVQRFYEPLAGNKVAGRVLIHGHDVKELDLKF
LRRNVAAVPQEPALFSGTIDDNLRVGNAEATDEEIIKAASAANADSFIAQLPEKYSTWVG
ERGVQLSGGQKQRIAIARAILKNSPILLLDEATSALDSESEKLVQDALGRVMQGKTVIKI
AHRTSTITSSDTIVVVENGKVAQSGSHNELLQSSNFYRNLFAMHSMKPELEDTISRGTTN
TNEKPDITQYRSSSQQHEVNEMLKSQPINANPTKGTKTTKSRSASFSRIWYGLNKFEFAK
VALGSFGAAFSGISKPLFGFYIMTIGVAYYKEDAKSQVGKYSIIFTVVGFLTLITHILQH
YHYGLVGEKAMGNLRVALFSDSPKSEVPFSQTRFLYIFAAVLRNEVAWFEKPENNVGFLA
MHIVSDTSMIKTIISDRMSVIVQCISSILIATVVSMKVNWRMGLVAWALMPCHFIGGLIQ
AKSAKGFSGDSAMAHRQLVALASESVSHIRTVASFVYEEQLLKKAQFSLEEPRRLSRVQS
IKYGVFQGVSLCLWNIAHAVALWYTTILVDKHQSSFEDGIRSYQIFSLTVPSITELWTLI
PTVISAITILKPAFEILDRKTEIPPDVPETISSEGITGRIDFESISFRYPSRPEVVVLDN
FNLSIETGAYVALVGPSGAGKSSVLALILRFYDPFKGRVLVDSKDIKEYNLHWLRRQIGL
VQQEPLLFSSSIRDNIFYGSEGASETEVVEAAMEANIHDFICSLPNGYDTVVGEKGCQIS
GGQKQRLAIARTLLKRPVILLLDEATSALDSETERIIMQALGSSKRRRDEEASRRITRIT
VAHRLSTVVNSDTIVVMENGRVVQMGDHSTLVADDNGVYSKLFQLQSHDT
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgagaacgatctcagatggattccatgcagtcgtccattgctcactcttaag
ttcggagatcacagacacttaaccaccatcactactgttgtagccattgtcggaaaccgc
cacaaggagatggatgaggttgaattggagaagaaggagaagaaggcagtgcagtcgaaa
ccggtgtcgttcggaaggcttctgagctacgcagacacggtggattgggtcttgatgggt
ctagggacggtgggctcggtggtgcacggcatggcacaaccaattgggtacctcttgctg
ggcaaagcgttggaggctttcgggagcaacatcggtgaccaagaagccacggtcagagct
ctagagaaggtgattccatttgtatggtatatggcaatcgctacgcttcctgcagggtta
cttgaaatatcatgttggatgtacacaagcgagagacaattagcacggatgagattagct
ttcatcgattcgattcttcaccaagacatcgaagctttcgataccgagctcaccaccgcc
aaggtcatagcatgtgtcacaagccacatgagcatcatacaagacgccataggcgagaag
ttgggtcatttcatctcctgtttctccacttatttcgctggagttgtaatcgccctcgca
tgctgctgggaagtagcgttactgtcgttgatggtggtgccgatgattctcgctatcgga
gctacttacactaaaaagatgaacagtttatcatccttgagaacaatgtatttgtcagaa
gcaacatctatagtagaacagactttatcgcatattggaacggtcttttcgttcgtggga
gagagctcgtcgataaaatccttcactgagaacatcaggcagcagtacatcataagcaaa
aaggaggcaggaattaaaggactgagtttgggattgtttcaaactgtcaccttctgctca
tgggctttggttgtttggattggagcagtcgttgttgttgcgcgaagagcgaatggaggc
gagacattggctgcaattatgagcattctgtttggagcaatatccataactcatgctgca
ccagacttccagatctttaatgctgcgagagctacaggaactgagatattccaagtgatc
gaaaggaagccaagaataagcagtgagaaaaaaggagtaacattggaaaaatttgttgga
gtgatagagctagatcgagtgtcgtttgcttacccttcgcgacccaataagctgatcctt
aaagacttctcactgtgcatggcagcagggaaagtgtatgcattggtaggcagcagcggg
tgtgggaaaagcaccatcctgtctcttgttcaaaggttttatgaaccattggcaggaaat
aaagttgcaggtcgggttttgatccatggccatgatgtcaaggagctggatctcaagttc
ctcagaagaaatgtagcagcagtgccacaagaaccagcactattttcaggcaccatagat
gataatttgagggttgggaatgcagaagcaactgacgaagagatcatcaaagcagcatca
gcagccaatgcagactcattcattgcccaacttcctgaaaaatactcaacttgggttgga
gagaggggagtacaactctcaggtggacagaaacaaagaatagcaatagcaagagccatt
ctgaaaaactctccaattcttctcctagatgaagctacaagtgcacttgattcggaatca
gagaagctggttcaagatgcactggggagagtcatgcaaggaaaaactgtgattaagata
gcacacagaacatccacaataaccagttcagatacaattgttgtggttgagaatggaaaa
gtagcacaaagtggaagccacaacgagctgctgcaaagcagcaatttctacaggaacttg
ttcgctatgcatagcatgaagccagaattagaagacacaatctcaaggggaactactaac
actaacgagaaaccagatatcactcaatacagatcatcttctcaacagcatgaagtgaat
gagatgttaaagagccagccaatcaatgctaatccaaccaaaggaacgaaaactacaaaa
agcagatctgctagtttctcaagaatatggtatgggttgaacaaatttgagtttgcaaag
gtagctttgggatcatttggagcagcattctctggaatatctaaaccattgtttgggttt
tacattatgacaattggagtggcatactacaaggaagatgcaaagtcacaagtaggcaaa
tattctattatattcactgttgttggcttcctcacgttaatcactcacatattgcaacac
tatcactatggtttggttggtgaaaaagcaatgggaaatctcagagtagcactgttttca
gactcacctaaatcagaagttcctttttctcaaacaaggttcctttatatttttgcagcc
gtactccgaaatgaagtagcttggtttgagaaacctgagaacaatgtaggattccttgca
atgcatattgttagtgacacttccatgatcaagaccatcatatctgacagaatgtctgtg
attgtgcaatgcatctcctcaatcctaatagcaacagtagtgagcatgaaagtgaactgg
aggatggggctagtagcctgggctctaatgccctgccacttcatcggtggtctgatacaa
gccaaatctgccaaaggcttctctggtgactctgccatggctcaccgacaacttgtcgct
cttgcatcagaatctgtgagccatataagaactgtagcttcttttgtttacgaagagcaa
ctgcttaagaaagcacaattttcattagaggagccaaggaggcttagcagggtacagagc
atcaagtatggagtgtttcaaggtgtctcactttgtttatggaacattgctcatgcagtt
gccttgtggtacaccacaatcctggtcgataagcatcaatccagctttgaggatggaata
agatcataccaaatcttctcactcacagttccatctatcactgagctatggacactgata
ccgacagttatttctgcaattaccatactcaaacctgcatttgaaatcctagataggaaa
acagaaattccaccagatgtgccagagaccataagctctgagggaatcacaggcagaata
gactttgaaagcatcagctttagatacccatcaagacctgaagtggtggtactagataat
ttcaacttaagtatcgaaactggagcatatgtggcacttgttgggcctagtggagccggg
aagtcctcagttttggcgctgatcttgaggttctatgatcctttcaaaggaagagttttg
gttgacagtaaagacataaaagagtataacttgcactggttgagacgccaaataggattg
gttcaacaagagccacttctcttcagctcgtcaatcagagacaacatcttctatggaagt
gaaggtgcttcagagactgaggttgtggaggctgcaatggaggccaacatccacgacttc
atctgcagtttgccaaatgggtatgacacagtggtgggggagaaaggatgtcaaatctct
ggtggacaaaagcagagacttgccattgcaagaacactgctgaagaggccagtgattttg
ctgttggatgaagctaccagtgcactagattctgaaactgagagaatcatcatgcaggct
cttggatccagcaagcggaggagagatgaggaggcatcaagaagaatcacaaggataaca
gttgcacataggttgtctactgtggtcaattcagatacaattgtggtgatggaaaacggt
agagtggttcagatgggggatcattcaactttagttgcagatgataatggtgtttactca
aagcttttccagcttcagagccatgatacataa
DBGET
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