KEGG   Zingiber officinale (ginger): 122019353
Entry
122019353         CDS       T08725                                 
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM-like
  KO
K04728  serine-protein kinase ATM [EC:2.7.11.1]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122019353
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:zof01001]
    122019353
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    122019353
   03036 Chromosome and associated proteins [BR:zof03036]
    122019353
   03400 DNA repair and recombination proteins [BR:zof03400]
    122019353
Enzymes [BR:zof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     122019353
Protein kinases [BR:zof01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   122019353
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122019353
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Meiosis-specific proteins
   DSB formation-related proteins
    122019353
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    122019353
SSDB
Motif
Pfam: TPR_ATM PI3_PI4_kinase FATC FAT M-HEAT_ATR TAN
Other DBs
NCBI-GeneID: 122019353
NCBI-ProteinID: XP_042432761
LinkDB
Position
9A:96350079..96433503
AA seq 2857 aa
MATSRDVQEIISKLSSDKAKAREEGVKLLSSWLEGERSVDFCKLLSRNTAKIKPDEIPHS
ETWPFLVTLLMRCISSEISTSKKRPPKLIFAKTLRMTIQYAEDARISGNSFLLFSVVKVV
FNHALDVIKDVPSYQLEYNSILRHLLTVKEYRYQMRKRVYCGLIVLYTTKLGTLMDLNPS
QAGSNEDSFRTIVILYVLLENPPGDYPDNIREDVVQTFTKIFFKVRVVHFYLYQGLKSSF
INYMRIQLSLIRSLSEGAPIIEQFLDVITKEFDHGINVAGVLWYDVSKDDKSGSLGSIRQ
SLMELAATVFYQACRIKCKATCNESNEKRLKMEHATGRVKDGIMKASCLWNGAFSFLIHN
YGLRLDKTLLIYWFEGAIEGLKRILGGSTLNSHDALLWLLRALQGFSSVFLFHGFHHLEE
RPKNSWFTSNEITNLRNCWQEIWSYLMRGLLVLSSFSSIIDVTLTLLGNMIERDQVSVIA
VPRDIWDLRTFKHMPTILRAFDHLIEAQVVVRFEINVSSMTTFRSFRTKYNVLKKILVSV
FLSAILSRKCCICVFFLSTFSTTKLILLKLQQAGVWNAQMVALVPEAVFSLCAGTVSPVP
SGHLSMAPRSCEDCAECGQILLMTDELEHLEKVLECSVEALAEIKCVPSSKEKTSCHSCV
CLPNQIRQPLIHELKEHLADFVTSNSNLAETSLSSQFYLCSLLCNSIYYSIISRITEGDK
SVIHAKVIEYILMILDHILLVVEDRCNELRCYNFVNIGFVLDSAGSTASSLCSLLSSPLF
KLLSGNDGSVCHLVRVTHAIEKLLVVFGKLFNVLSNVSSNMPEIDFDHLSVSSMDSSQCI
IAEHSARIVDMELDAYVSSKDVDLVALRGNKNSISSTPLQWKLELVSIISNFYAALPCCT
WEILSEMMGKENDSKVRENILFNLCKHFSGPSGSLSALVSLISDFTNKDGIMKFYNRNIL
TCINVLLKSLESIYSSRNSKKKSQVSNESMPFEDLNSLCNILNAIAEVGLADWYARIELI
NCISCLVLIEPQSAQVLIERLLVMLQDPDYRVRLFLARKISLLFQTWDGHNELFNDICLN
FGLEMVRFGKGKTVKAHQILDAGPQGTLFVETALITLAHLALASEEIEIEAAFMMCVVAA
MEPAERELVYALLDNLSRSLQYASKSKYLEQLIGPILARWVACDVNLMSLIEVQSLFCDE
SNVKCFVKYCCPWLLPPLMLSGDNARLNWISKVSLQPLSDLVKEYFVPICASCIAVYCSM
RSDKEIAGLALNNSILQFGKISEVERDELVKKNMVSIVSFLLSLTSCSVDPELPYFTKDT
VVLAVQTVVDGFLDIDTNHISGVVDKINIFRPDRIFMFLLEIHYQITAAVHTRHICHRLS
AMEVLTRLIGHRATNPSSSYFYFSYIMSIIGQLICSQFLQEQCCIILSTLLEAFKTESGK
DAYNVLGEQLQFLVSKLVSCCIPTESQEEKIAPLSPRIISLLHELIVDADPLLLDHIKEL
ELFPEVKSLEKIRLFHDDLCHSYSVRDQLLKDSSTEKGFAALSSLDAYEKSLVVVHSKGV
NIDVVEKMLLDMRKTSDGAVSLEDSSLWTTHSKTYKMWVCTLVHSLILHCDDIILRLCQN
IVLRKEEIAELLFPNVLVNIAKTIGSDNHLCHIISQEVEKNIFCDSNDLVKSIQTMLSAL
NKLRSIYVAEIAGSFSTSMKHSRTPTGTKTRGASATSKDRSLNVSMSKSSWKKVYWLSID
YLVVAKAAVHCGSYFTAVLYIEHWCEERFNGLQLGYPDFSHLESSPPHVDLLMTAFEHIN
EPDSIYGIVQTNQVKLLNYLYYDLLVRSASVGYGKHSFADSLTSSQANAEKSSWKFYKGL
MRSLQKTGCTHILDVYCHGLTNYSAYLQHDSEFADLQYEAAWRSGNWDFSLXFLESTPYS
RQSSSSCQFNENLHSCLRSLYEGNASNAFLLIKLECCPGGNQTIKLCIYIGFASIHCKCE
YIHSAIVKLQILDHLGVSWDIRWKPHNHQKTTTYSKITKISHDPVIPTEDQLGWFKTEWR
TVLRHAQLHLNLFEPLIAFRRVLFQILDCKEFTTEHLLESASTFRKGSRFSLAASALNEL
KQLCCQMEQKPTSQMYFLGRLEEAKLLRAQGQHDMAINLARYIVENNSTGEKMANIYRLV
GKWLAETRSSNSRIILEQYLKHSVEVTELSKSTSKKYLSRQCQSYYQLAHYADGLFQSYE
ARLASSEWQAALRLRKHKTRELDALIKRLKGSSKGEKIDYSIKIQELQKQLTMDREEAEK
LHDDRENFLSLALEGYRRCLVIGGKYDLTVVFRLVSLWFNFYSRNNVVHEMISTVKEVQS
YKFIPLVYQIASRLGIYKDGQSSTSFQIALVSLVRKMAIDHPYHTIFQLLALANGDRVKD
KQRSRNSFVVDMDKKLAAENLLNELLTFHGALIRQMKQLVEIYIKLAELETKKEETNRRV
PLPREIRNIRQLELVPVVTATVPVDPTCQYQEGSFPHFKGLADSVMVMNGINAPKVIECL
GSDGHIYRQLAKSGNDDLRQDAVMEQFFDLVNNFLQNNRDTWKRRLRIRTYKVVPFTPSA
GILEWVDRTIPLGEYLLGSARNGGAHGRYGVGDWTFLQCREYMMNEKDKRKAFVKICDNF
RSVLHYFFLEKFLQPADWFQGRLSYTRSVAASSMVGYIVGLGDRHSMNILIDQETAEVVH
IDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEETLSVMRANKEALLT
IIEVFIHDPLYKWALSPLKALQLQKETDDGVDASLESSQDDEGNKDAARATLRIKEKLDG
YEAGEIRSVQGQVQQLIQDAIDIDRLCHMFPGWAAWL
NT seq 8574 nt   +upstreamnt  +downstreamnt
atggcgacctcgagggatgtccaggagatcatctccaagctatcgtccgataaagccaag
gctcgggaggaaggggtaaaacttttgagtagctggttagaaggtgagcgatcggtggat
ttctgcaagcttctcagccggaacactgccaagatcaagccggatgagatcccacactct
gagacatggccttttctagtcacgttgctcatgagatgcatctcgtcagaaatttctaca
agtaagaaacgcccaccaaagttgatctttgcgaagactcttcgaatgacaattcagtat
gcagaagatgcaaggatctcaggaaacagttttcttttattttctgttgtgaaagtggta
ttcaatcatgcattggatgttattaaggatgttcctagctatcagttagaatacaacagc
attcttaggcatcttctaactgtcaaagagtaccgatatcaaatgaggaagcgggtttat
tgcggtctaatagttctctacaccaccaagttgggtacattgatggatttgaatcctagc
caggccggttccaatgaggatagtttccgcactatcgtaattctttatgttctcttagaa
aacccacctggtgattatccagataacattcgagaagatgttgtgcagacatttacaaaa
attttcttcaaagtgcgggttgttcacttctatctgtatcaaggactaaagagttccttt
attaattatatgaggattcaactaagcctgattcgaagtttatcagaaggagctccaatt
atagaacaatttcttgatgttatcaccaaagaatttgaccatggcataaatgttgctgga
gtgctttggtatgatgtatctaaagatgataaatctggatctcttggtagcattcgacaa
agcctcatggagcttgcagccactgttttctatcaggcctgcagaattaagtgcaaagcg
acttgtaatgagagtaatgagaaacggttgaagatggagcatgctactggtcgtgttaag
gatgggatcatgaaagcttcttgcctatggaacggggcattttcttttcttattcataat
tatggtcttcgactggataagaccttattaatctattggtttgaaggtgcgattgaaggt
ttgaaaaggatactaggtggttctactttgaattcacatgatgcacttctttggctttta
cgggcattgcagggattttcatctgtgttcctgtttcatggtttccatcacctagaagag
cgtcccaagaactcatggttcacctcaaatgagattacaaatctcagaaattgttggcaa
gagatttggagttatttgatgcggggattacttgttctgagtagtttctcttctattatt
gatgttactttgacactacttggcaatatgattgagagggatcaagttagtgtaattgca
gttcctcgagatatatgggatttgaggacatttaagcacatgcctacaattttgagggca
tttgatcatcttattgaggcacaagtggttgtaagatttgagattaatgtttcttccatg
actactttcagatcttttagaaccaaatataatgtgcttaagaaaatccttgtttcagtt
tttctctctgctattctttcaaggaagtgttgcatctgtgtattctttctgtcaactttt
tcgactactaaactaatacttcttaagttgcagcaagctggtgtatggaatgcacaaatg
gttgcactcgttcctgaggctgtattttctctttgtgctggtactgtgtctcctgttcct
tctggacatttatccatggctcctagatcttgtgaggactgtgccgagtgtggacagatt
cttctgatgacggatgaactggaacatcttgaaaaagttttagaatgttctgtggaagct
ttggcagaaattaaatgtgtaccttcctctaaggagaaaacaagctgccatagttgtgta
tgccttcccaatcagatcagacaaccattaattcatgaacttaaagaacaccttgctgat
tttgtaacttcaaattccaacttagcagagacttctctttcatctcaattttatttgtgt
tcccttttgtgtaatagcatctactattcaataatatcaaggattacagaaggagataaa
tctgtcattcacgctaaggttattgagtatattttaatgattctggatcacattcttttg
gtggtagaggatagatgcaacgaattgagatgctacaattttgttaatattggttttgtg
cttgactctgctgggtccactgcatcctctctgtgtagcttgttgtcctcaccactattt
aagcttttgagtggcaatgatggctctgtttgccaccttgtcagggtcacacatgcaatt
gagaaactgttggtcgtctttggaaaattattcaatgtgttgtcaaatgtttcaagcaat
atgcctgagatagattttgaccatctatctgtatcatctatggattcttcacaatgtata
attgctgaacatagtgccagaattgttgatatggagcttgatgcttatgtatcttcaaaa
gatgtggatcttgttgcactgcgtgggaataaaaattccatttcttcaacacctttgcag
tggaagttagaattggtttctatcatttcaaatttttatgcagcattaccatgctgtaca
tgggaaatcttgtctgagatgatggggaaagaaaatgactctaaggttcgtgaaaatatt
ttgtttaacctttgcaaacatttttctggcccttcgggaagtttatctgccttggttagt
ttgataagtgactttacaaataaggatggaattatgaagttttataacagaaatattttg
acttgcattaatgttctgttgaagtcattggagtccatttattctagcagaaattcaaag
aaaaagagtcaagtatccaatgaaagcatgccatttgaggatttgaattctctttgcaac
atccttaatgcaattgctgaggttggtcttgcagattggtatgctcgtattgagctgata
aattgtattagttgtcttgttttgatagagcctcaatctgcccaggttttgattgaaaga
cttctggtcatgcttcaagaccctgattatcgtgttagactctttttagctagaaagatt
tccctcctttttcagacatgggatggccataatgagttgttcaatgacatttgtttgaat
tttggtttggaaatggtgaggtttggtaaagggaagactgtgaaggcccatcagatctta
gatgcaggtccacagggcacactttttgtagaaacagctcttatcactttggcgcatctg
gccttagctagtgaagaaattgaaattgaggctgcctttatgatgtgtgtggttgctgct
atggagcctgctgaacgagagctggtgtatgcacttcttgacaatttatcaagaagtctc
caatatgcttccaaaagcaagtacttggagcagctgatcggtccaatccttgctcgttgg
gtggcttgtgatgtaaatttaatgtcccttattgaggtacaaagtctattttgtgatgaa
tcaaatgtaaaatgttttgtgaaatactgttgcccatggcttctacctcctctaatgttg
tctggagataatgctcgtcttaattggatatcaaaggtttctctgcagcctctatctgat
cttgtaaaggaatactttgtgccaatttgtgcgtcatgcattgcggtgtattgtagtatg
agatctgacaaggaaattgcagggctggcccttaacaattcaattttgcagtttggcaaa
atttctgaggttgagagagatgaacttgttaagaaaaacatggtgtcaattgtcagcttc
cttctgtcacttacttcctgttctgttgatcctgaactgccatactttacaaaagatact
gtggttcttgcagttcaaacagttgtagatggttttctagatatagatactaatcacatc
agtggtgttgtggacaaaataaatatttttcgccctgacaggattttcatgtttttgtta
gagatacattatcagataactgctgcagttcatacacgacatatttgccatcgactatct
gcaatggaggttcttactcggctaatcgggcatagggctactaatcctagtagttcatat
ttctatttcagctatattatgagtattattggccagttgatttgtagtcaattcctccaa
gaacagtgttgtattatcctctctactttgcttgaggcatttaaaacagaatctggaaag
gatgcttacaatgtgcttggtgaacagcttcagtttttggtttcaaagttggtatcatgt
tgcattcctaccgaatcccaagaagaaaagattgctcctctttcacccaggataatatct
ttgctccatgaactaattgtagatgctgacccattgcttctagatcatatcaaagagttg
gagcttttcccggaggtcaaatcattggagaaaatacgactatttcatgatgacctctgc
cacagttattctgtgagggatcaacttttgaaggattcttcaactgaaaaggggtttgct
gctttatcgtctcttgatgcatatgagaagtctctggttgtggttcattcaaaaggtgtg
aatattgatgtcgtggaaaaaatgcttttggatatgagaaaaacttctgatggagcagtt
tcattggaagattcttctctgtggacaacacacagtaaaacttacaaaatgtgggtctgc
acattggtgcactcacttattcttcattgtgatgatataattcttagactttgccaaaat
atagtgttacggaaagaggagatagctgagcttttatttccaaatgtcttggtgaatata
gctaagacaattggttcagataatcacctttgtcatattatctctcaagaggttgagaag
aacatcttttgtgattctaatgacttggttaagtcaattcaaactatgctgagtgcattg
aacaaacttcgatctatctatgttgcagaaatagctggttctttctcaacatctatgaag
catagcagaaccccaactggaacaaaaactcgtggtgcatcagcaacttcaaaagaccgt
tcacttaatgtttctatgtcaaagtcttcatggaaaaaggtgtactggctttcaattgac
tatcttgtggtagctaaagcagctgttcattgtggatcatacttcacagcagttttgtac
attgaacattggtgtgaagaacgttttaatggtcttcagttaggataccctgatttctca
catctggaatcgtcgcctccacatgtggatctgcttatgactgcatttgaacatattaac
gagccagacagtatatatggcattgtccaaacaaaccaggtaaaattgctgaattattta
tattatgatttacttgtgagatctgcttccgttggctatggaaaacattcttttgctgat
tcactcacttcttctcaagccaatgcagagaaaagtagttggaagttttacaaaggttta
atgagatcattgcagaaaacaggttgcactcatatattggatgtctactgccacggattg
actaattatagtgcctatctgcaacatgattctgaatttgctgatttgcagtatgaagct
gcttggaggtctggaaattgggacttctcattanngtttctggagagcactccttattca
agacaatcttctagtagttgtcaattcaacgagaacttgcatagttgcctgaggtccttg
tatgagggaaatgccagtaatgcttttcttttgatcaaacttgaatgctgcccaggtgga
aatcaaaccatcaaattatgtatatatataggatttgcttctatccattgcaagtgtgaa
tatattcattcagccattgtgaaacttcagatattagaccatctcggtgtctcctgggac
atccgctggaagccacacaatcatcagaaaactacaacatactcaaagataactaaaatt
tcacatgatcctgttatcccaacagaagaccagttgggatggtttaaaactgaatggcgt
actgtcttaaggcatgcacagctacatttaaatttgtttgaacctttgattgcttttagg
cgtgttctatttcaaattttagattgcaaagagttcacaaccgaacatctgctggaatct
gcttcaactttccgtaagggttccaggttctcccttgctgcttctgctttaaatgagctg
aagcaactctgctgtcagatggaacagaaacctacatcgcaaatgtatttccttggaagg
cttgaagaagcaaaactattaagagctcaaggtcagcatgatatggctatcaatcttgca
agatacattgtagagaacaactccacaggagaaaagatggctaacatttatcgattggtt
gggaagtggttggctgaaactagatctagcaactcaaggattatcttagaacagtacttg
aaacattcagtggaagtcacagagttgagcaaaagtacaagtaagaaatacttgtctaga
caatgccaaagctattaccagttagcacactatgcagatggtctattccaaagctatgaa
gcaagactagcttctagtgagtggcaagcagctctgcggttgagaaagcacaaaacgagg
gagttggatgcactcatcaagaggctaaaaggttcttcgaagggtgagaaaatagattac
tcaatcaagatacaagagttgcaaaaacaacttacaatggacagggaagaggctgaaaaa
ttgcatgatgacagagagaacttccttagcctcgctttagagggataccggcgttgtctt
gttataggtggcaaatatgatctgacagtggtatttcgtcttgtttccttgtggttcaac
ttctactcgagaaataatgttgtccacgagatgattagtacagtgaaggaggttcaatca
tacaaatttataccactggtatatcagattgcgtcaagacttggtatctataaagatgga
caaagctcaaccagtttccagattgctttggtttctcttgtaaggaaaatggctatagat
catccataccatactattttccagcttcttgctttagcaaatggggaccgtgtaaaagac
aagcaaaggagtagaaactcatttgttgtagacatggacaaaaaacttgcagcagagaat
ctcttgaatgagttattgacatttcatggagctcttataagacagatgaaacaattagtt
gagatttacatcaaacttgctgaattggagacaaaaaaagaggagactaataggagagta
ccgttacccagagaaatccgaaatattcgtcagctagaacttgtaccagttgtcacagct
acagttcctgttgatcccacttgtcaatatcaggaaggttcttttccacatttcaagggc
ttggctgattctgtaatggtaatgaatggcataaatgctcccaaagtaattgagtgcctt
ggttcagatggtcatatatatcgtcaacttgcaaagtctgggaatgatgatttacgacag
gatgctgtcatggaacaatttttcgatttggtaaataatttcttgcagaataatagagat
acttggaaaagaaggctaagaattcgtacgtacaaggtagtaccctttactccgagtgct
ggtatacttgaatgggttgatcgtactattccacttggcgaataccttttaggaagtgca
agaaatggtggagcacatggacgttatggggttggcgattggacatttcttcagtgcagg
gaatacatgatgaatgagaaggacaagaggaaggcatttgtgaaaatctgtgacaatttc
aggtctgttctgcattatttttttctggagaagtttttgcaacccgcagattggtttcaa
ggcaggctttcttatacaagaagtgttgcagcaagttccatggttggttacatcgtagga
cttggagataggcattcaatgaatattctcatagatcaagaaactgcagaagtagtccac
atcgaccttggggttgcctttgagcaaggacttatgcttaaaactccagagagggttcca
tttaggctgactagggacattatagatgggatgggtgttaccggtgttgagggtgtcttc
agaagatgttgtgaagaaactctctctgtcatgagagcaaataaggaagcactgctaact
attattgaagtattcatccatgatcctttgtataagtgggcactctcacctctgaaagct
ttgcagctgcaaaaggaaactgatgatggtgtggatgcaagcctggagagttcacaagat
gatgaaggaaacaaagatgctgcacgagctaccctcagaatcaaagaaaaattagatggt
tatgaagcaggtgaaataagaagcgtgcagggtcaggtccagcaactcatacaggatgca
attgacattgaccggttgtgtcatatgttccccggttgggcggcatggttgtga

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