Zingiber officinale (ginger): 122019403
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Entry
122019403 CDS
T08725
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122019403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122019403
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122019403
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122019403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122019403
NCBI-ProteinID:
XP_042432808
LinkDB
All DBs
Position
9A:complement(103140867..103180232)
Genome browser
AA seq
1142 aa
AA seq
DB search
MSTKSKSVSLSLSAPVKSAVDKSQLISEFCTVRGLVKHHVDSYNYFIDHGIKKILQANNF
FVCRHDPNFYLRYTNIKVGRPTVEVDHATRMLTPHECRLSDQTYAAPIMVDVEYTIANQA
TKNPETLAGLVIGRMPIMLRSSHCVLSGKDDDELSKLGECPLDPGGYFIVKGTEKVILIQ
EQLYKNHIIIDTDAKGRVTASVTSSTHETESKTVFFMDKEKIYLQLNQFNKPIPIMVILK
AMGMESDQEIVQMVGRDPQYGDLLFPSIQECASERIYTQQQALNFLDGKIGRSNPTHNGN
KKTSLAMAILLDVFLAHVPLYKGNFRPRWIYAAVMLRRMLDAILNTDTFDDKDYLGNKRL
ELSGQMISWLFEDLFKSMNTRTLELVNREYEKASRSTHMNFIHYIRRNYDITLGLERSIS
TGNWDLKRFKMHRKGVSQVVSRLSYIAVLGHMTRISPQFEKTRKASGPRALHPSQWGMFC
PCDTPEGEGCGLTKNLALLTHITTDEENGPLISLCYTLGVEDLALLSGEELHLPGSFLVM
FNGLIIGKHRQPKLFAGNMRKLRRRGKIGEFVSIFVNEVQHCVYIASDGGRVCRPLVIAD
RGISRIKDYHMKELQLGIRTFDDFLRDGLVEYLDVNEENNALIALHECENNIDDPEKKKG
DITHIEIEPLTILGVCAGLIPYPHHNKSLYDTYQCAMGKQAMGNIAYNQLCRADTLLNLL
VYPQRPLLTTTTIELVGYDKLGAGQNAIVAVMSYGGYDIGGAIVMNKSSLDRGFGRCIVM
KKYSVIKEIYGNQTIDRIVKPRKDEPSMQILDDDGIAAPGEIIRNNDIYVNKKTPINTRK
RTDNPTEYRKTPAVYKGPEGETSVVDRVILYSDTSNKLCIKCIIRHTRRPEIGDKFSSRH
GQKGVCGAIVQQEDLPFSECGVCPDLIINPHEFISGMTLGKMFELIGGKAGVSCGRFHYG
DAFEEPSVHADKVEDISNTLAKHGFSYSGKDFLYSGITGWPLQAYIFMGPIYYQKLKHMV
IDKMHARATGPHVLLTRQPTAGRSQDGGLRLGEMERDCLIAHGVSMVIFERLMLSSDPYE
VQVCRQCGLFGYYNYKSEIATCSMCKKSGDNMSTVKLPYATKLLIQELQSMNIAPRLKLD
EA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaaatcaaaatcagtctcactttcactctcagcaccggtcaaatccgccgtc
gacaagtctcagcttatttccgagttttgtacggtgagagggctggtgaagcatcatgtg
gattcatataattacttcatcgaccatggtatcaaaaagatactccaagccaataatttc
ttcgtttgccgtcacgaccccaacttttatctgaggtacactaatattaaagttgggagg
ccaactgttgaagtggaccatgccacgaggatgcttactccacatgaatgccgactctca
gatcaaacatatgctgcacccataatggttgatgtcgaatatacaatagcaaatcaagca
actaagaatcctgaaacgctagccggtttggtcattggaaggatgccaattatgctacga
agtagccattgtgttttgagtgggaaggatgatgatgaattatcaaagcttggggagtgt
cctcttgatcctggtggttacttcattgttaaaggaactgagaaggtgattttgatacag
gaacaactctataagaatcatatcatcattgacactgatgctaagggacgggtgacagca
tctgttactagtagcacacatgaaacagaaagtaaaacagtattctttatggacaaggag
aagatttatctgcaactcaatcaatttaataagccgattcctatcatggtgatcttaaag
gctatgggaatggagagtgaccaagagattgtgcaaatggtaggaagagatccacaatat
ggagatcttctctttccttcaattcaggaatgtgcatctgagagaatttatactcagcaa
caggcattaaatttcctagatggaaagattggaagatctaatcctacacataatgggaac
aaaaagactagtctggcaatggctattcttcttgatgtgtttcttgcacatgttccgctt
tacaagggtaatttccgtcctagatggatatatgcagcagttatgttaagacgtatgctt
gatgcaattttgaataccgatacatttgatgataaggattatttgggcaacaaacggctg
gaactatcaggacagatgatttcttggttgttcgaggatctgtttaaatctatgaacact
cgtacattagagcttgtgaacagggaatatgaaaaggctagccgctccactcatatgaac
tttatccattatattaggcgaaattatgacatcacattaggcttggaaagatccatttca
acaggtaattgggatttaaaacggtttaaaatgcatcgaaaaggagtatctcaggttgtt
tcaagattatcatatatagcagtgttaggccacatgacccgaatatctccacagtttgag
aagacaaggaaagcaagtgggccaagggcattgcacccaagtcaatggggtatgttttgc
ccatgcgacactcctgaaggagaaggttgtgggttgacaaaaaacttagctttgttgaca
catattacaactgacgaggagaacggtccactgatttctctgtgttacactctaggcgtt
gaagatttagcacttttatctggcgaggagcttcacttaccaggatcttttttggttatg
tttaatgggcttataattggaaaacatagacaaccaaagctatttgctggtaacatgaga
aagctccgtagacgtggtaaaattggggagtttgttagcatttttgtgaatgaagtgcag
cattgtgtttatattgcctcggatggtggccgggtttgtcgtccattagttattgctgac
agaggcatatcaaggatcaaggattatcacatgaaagaattacagcttggaattcgtact
tttgatgattttctacgtgatggattggttgaatatctcgatgttaatgaagagaacaat
gcattgatcgcattgcatgaatgtgaaaataacatagatgatcctgaaaagaaaaagggt
gatataacccacatagagattgagccattgacaattttaggtgtttgtgctggtttaatt
ccttatcctcaccacaacaaatctctatatgatacttaccagtgtgcaatggggaaacaa
gctatgggtaatattgcttacaatcagctttgtcgagcggatactttgcttaatttgttg
gtgtatccccaacgcccattgctgacaacaacaacaattgaactggttggatatgataag
ctaggagctgggcagaatgcaattgttgctgttatgagttacggtggctatgatattggg
ggtgctattgtcatgaacaagtcatctcttgatcgtggttttggccgttgtatagtgatg
aaaaagtattcggtaataaaagagatctatggtaatcaaaccatagacagaatagttaag
ccaaggaaggatgaaccaagcatgcagatattagatgatgatggaattgctgctcctggg
gagataattcggaacaatgacatttatgtcaacaaaaaaactccaataaatacaaggaag
agaactgataatccaacggagtaccggaaaacacctgcagtgtacaaaggccctgaaggt
gaaacttctgtggttgatcgcgtgatactttactcggatactagtaacaagttatgcatc
aaatgtatcatccgccacactcggaggccagagataggggataaatttagtagcagacat
ggtcaaaaaggtgtttgtggtgccatagttcagcaggaagatttgccattttcggagtgt
ggggtatgccccgatttaattataaatccacatgaatttattagtgggatgacactgggc
aaaatgtttgagcttattggtggaaaagctggagtttcttgtggccgatttcattatggt
gatgcatttgaagaacctagtgtccatgctgataaggttgaagacataagcaatacactt
gcgaagcatggatttagctatagcggcaaagatttcctctactcaggcattacaggctgg
ccattacaagcatacattttcatggggccaatctactatcagaagttgaaacatatggta
attgataaaatgcatgctcgcgctacagggcctcatgtgttactgactagacaacctact
gcaggaagaagccaagatggaggactgcgtctaggagaaatggaacgtgactgtttgata
gcacatggtgtgagtatggtgatatttgaacgtttgatgttgtccagtgacccatacgaa
gttcaggtctgcaggcagtgtggcctgttcgggtactataattacaagtcggagatagcc
acttgttcaatgtgcaaaaaaagtggcgacaatatgagcactgtcaaacttccatacgcc
accaagcttctaatccaggagttgcagtcgatgaacattgctccacgtttgaaattagat
gaagcatga
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integrated database retrieval system
