Zingiber officinale (ginger): 122019447
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Entry
122019447 CDS
T08725
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122019447
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122019447
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF7446
Motif
Other DBs
NCBI-GeneID:
122019447
NCBI-ProteinID:
XP_042432844
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Position
9A:107678451..107679516
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AA seq
185 aa
AA seq
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MLGYVIGVAGWATGLEFEGGRGYDVDGIQIKPKSRHIWIDRCSLQDYDDGLIDITRESTD
ITVSRCRFANHDKTMLIGADKSHVTDRCIRVTIHHCFFDGTRQRHPQLRFGKVHLYNNYT
RNWSRYAVCASVEAQILSQCNIYEVGQKKLVFRYMPEKAADREEVKAGWINQPSIFVQAS
LKMSA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcttggctatgtcattggtgttgctggctgggctactggtctggaatttgaaggtggc
agagggtatgatgtcgatggtattcagataaagcccaagtcgaggcatatttggatagac
cgctgcagcttacaagattatgatgatggactaattgatatcactcgcgaaagtactgat
atcaccgtttcaagatgtcgcttcgccaatcatgacaagacaatgcttattggagcagac
aagagtcatgttaccgatagatgtattcgcgttaccattcaccattgcttcttcgatgga
acaagacagagacaccctcaacttagatttggcaaagttcacctttacaacaattacaca
agaaactggagtagatatgctgtctgtgccagtgtagaagcacagatcttgtctcaatgc
aatatttatgaagtaggacaaaagaagttggtatttaggtacatgcctgagaaggcagcc
gatcgagaagaggtgaaggcgggttggataaaccaaccatctattttcgttcaagcttca
ttgaaaatgagtgcataa
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