Zingiber officinale (ginger): 122019475
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Entry
122019475 CDS
T08725
Name
(RefSeq) novel plant SNARE 13-like isoform X1
KO
K08494
novel plant SNARE
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122019475
Membrane trafficking [BR:
zof04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
122019475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
VBS_C3G9
V-SNARE
Hydro_N_hd
Occludin_ELL
Exonuc_VII_L
TMPIT
ATP11
DFF-C
DUF6988
Vps53_N
Motif
Other DBs
NCBI-GeneID:
122019475
NCBI-ProteinID:
XP_042432873
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All DBs
Position
1A:complement(13271695..13287026)
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AA seq
296 aa
AA seq
DB search
MSSDLPISPELEEIDGKIQDIFRALQNGFQKLDNIKDSNRQSKQLEELTGKMRECKRLIK
EYDQELKNQENQNPPEVNKKLNEKKQTMIKELNSYVALRKTYQSSLGNKRVELFDMGAGT
SDPVAEDNIKMASDHGLLLSCGEPPVVSWVGQVFQLHFTSWHLHGSEMSNQELIYAGRQQ
MDETDQAIERSKMVVEQTIEVGTQTAANLKGQTEQMGRIANELDTIQFSIKKASQLVKEI
GRQVATDKCIMLFLFLIVCGVIAVIIVKIVRPNNKSIPDIPGLAPPAPTGRKLLSA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcgatctaccgattagcccggagcttgaagagatcgatggcaagatccaggac
atcttccgagcacttcagaacggattccagaaattggataatattaaagattctaacaga
cagtctaaacagttggaggagcttacagggaagatgagggaatgcaagcggttaattaaa
gaatatgatcaagaacttaagaatcaagagaatcaaaatcctccagaggttaataaaaaa
ctcaatgagaagaagcagaccatgatcaaggaactcaactcatatgtggccttgaggaaa
acgtaccaaagtagcctcggtaataaaagagttgaactctttgatatgggtgctggaacc
agtgaccctgtagctgaggacaacattaagatggcatcagatcatggcctactgttatcc
tgtggtgagcctccagtggtgtcttgggttgggcaagtgtttcaactgcatttcacatct
tggcacttgcatggttcagagatgtctaatcaagagctcatatatgctggaaggcagcag
atggatgagactgatcaagctattgaacgatcaaagatggttgtagagcaaaccatcgaa
gtaggtactcaaactgctgctaatcttaagggccagacagagcaaatgggtcgaattgct
aatgagctggacactatccaattctcaatcaagaaggcttctcagttggtaaaagagatt
ggtaggcaggttgctacagataagtgcatcatgctcttcctatttcttatagtttgtggt
gtaattgcagtgatcatcgtgaagattgtgcgtccgaacaacaagagcattcctgatata
cctggattagcgcctccagctccaacaggaaggaaattactgtctgcttaa
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