Zingiber officinale (ginger): 122019695
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Entry
122019695 CDS
T08725
Name
(RefSeq) sister-chromatid cohesion protein 3-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122019695
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122019695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
HEAT
HEAT_2
Cnd1
Nop52
Motif
Other DBs
NCBI-GeneID:
122019695
NCBI-ProteinID:
XP_042433098
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Position
9A:22940560..22955082
Genome browser
AA seq
1123 aa
AA seq
DB search
MEHAAVVPEAPVRRKRGRPPKNASKAGVSKPSVSTVEKVDRSPTNEEQGSGDGSYDAFDD
HAPKAKRKAAIRAAGWKEDQSLIDVIKHNGRVINHAVKKWIERYELDPKPATIEILMLLF
EACGAKYKLEVASFEETNVDDVVVSLVELAKKGEIEDNFNSKQKELKNFKENLASFWDNL
VIECQNGPLFDKFLFEKCMDYAIALSCTPPRVYRHVASLVGLQLVTSLINVAKMLSGQRE
TTQRQLNTEKKKNNDGPRLESLNKRLSQTHEKITTMEEMMRKLFKGLFMHRYRDVDPEIR
MSCISSLGNWILLYPSLFLQDLYLKYLGWTLNDKSPGVRKASIIALQNLYEVDDNVPSLG
LFTERFCSRMIELADDIDIAVAVSAIGLLKQLLRHQLLTDDELGPLYDLLIDEPPLIRRA
IGELVYDHLIAQKIKSSHSGRKDGEEESSEVHLGRMLQILREFPDDPMLSTYVIDDVWDN
MKAMKDWKCIISMLLDENPHIELTDVDATNLVRLLYASARKAVGDKIVPAADGRKQYYTK
VQKETFENNRRKITTAMMKKYPQLLHKYIADKAKISSLVEIMGLLKLELFSLQRQDQNFK
AILELIVDAFFKHGEKDTLRSCIRVITFCSTDSPADLQDYAQNKLKDLENDLIIKLKAAI
KEVEMGGDEYSLLVNLKRLNEFQLTKFVPVDSLYGDMSSILKLLRDIDNEVKCFLLLNMY
LHVAWSLTFIDVESPESSINELLSKRATLFEQLECFINELPNAPQEGRIGNLLSYRVCVI
LADLWCLFENSRFSSTKLHRLGYHPDISSVEKFWKLSQQLLSISDETEEEDSNEEYIEDT
NRDVVMIAAAKLVIHRVTKDYLAAEIISHFVMHGASITNIIKNFITSLRKTAKDEMPSIF
FEALKKTYQRQALGNESLASNTYSDCKDLSSRLSATFGGAARNKHKWEILKIIKDGISYA
FSDAPKHLSFLEVAVLPFVTKLPISDLLEILKDVQKRSDKVNINEDPSGWRPYSVFVEYL
QEKCAKNDLQDEKEGNLPKRRGRPRKAMNVEGKRLFDGHESSEEDSISGSEQDDQDEEED
EEAQQPLIHTFRASASKLRSMRVAQPDSSARQAGSGRTTGTDH
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgccgccgtggtccccgaagcaccagttcgccggaagaggggcaggccgccc
aagaatgcgagtaaagcaggggtaagcaaacccagcgtctccaccgtggagaaggtggac
cgcagccctactaacgaagagcaaggatccggggatggctcctatgatgctttcgacgat
cacgccccaaaggctaagaggaaagcggcaattcgggctgccggatggaaggaagatcaa
agcttgatcgatgtcatcaagcataatggaagagtgattaaccatgctgtcaaaaagtgg
attgagcgctatgaattagatccaaaacctgcaacaattgaaattttgatgttgctcttt
gaggcctgtggagccaaatataaactagaagtggcttcctttgaggagactaacgtggat
gatgttgtggtctcacttgtggagctagctaaaaaaggtgaaatagaagacaatttcaac
tcaaagcaaaaagagcttaagaacttcaaagaaaatcttgcatcattctgggacaacttg
gttattgaatgtcaaaatgggccattatttgataagtttttgtttgagaaatgcatggat
tatgcaattgcactgtcatgtactcctcctagggtttatcggcatgtggcttcgctggtt
ggtctccagttggttacatccttaataaatgttgcaaaaatgctttctggacaacgtgag
accactcaaagacaattaaatactgaaaaaaagaagaacaatgatggaccacgtctggag
tctctcaacaaaaggttatctcagacacatgaaaagatcactaccatggaggagatgatg
cgcaaactatttaaagggttatttatgcacaggtatcgagatgttgatccagagataaga
atgtcttgcatcagttctctcggtaactggatactattgtatccatcacttttcttgcag
gatctatacttgaaatatcttggttggacactgaatgacaagagtcctggagtcagaaaa
gcttcaataattgcacttcaaaatctatatgaggtggatgataatgtgccatcacttggt
cttttcactgaaagattttgcagccgtatgattgagcttgctgatgatattgatattgca
gtggctgtatcagccataggtcttttgaaacaactactaagacatcagcttctaacagat
gatgaattaggccctttgtatgatctgcttattgatgaaccacccttaatcaggcgtgca
attggagaattagtatacgatcatttgattgctcagaaaattaaaagttcccattctgga
cgtaaagatggagaggaagaatcctctgaggttcatctaggacgcatgttgcaaattctt
cgggaatttcctgatgatccaatgttaagtacctatgttattgatgatgtttgggataac
atgaaggccatgaaggattggaagtgtatcatatccatgcttcttgatgagaatccacat
attgaattgacggatgtcgatgcaactaacttggttaggctgctctatgcttctgctagg
aaagctgttggagacaagatagttcctgctgctgatggccgaaagcagtattacacaaaa
gttcagaaagaaacatttgaaaacaatagacggaaaataacaactgccatgatgaagaaa
tatcctcagctgttgcacaagtatatagctgacaaagcaaagatttcttctttggttgag
attatgggacttctaaaacttgaacttttctctctacaaaggcaggaccagaattttaag
gcaattctggaacttattgtggatgcgttttttaagcatggggagaaagacacattgaga
tcttgtatccgcgtgataacattttgttcaacagatagtccagctgatcttcaagattat
gcacagaataagctgaaggatctggagaatgatctaataattaagttaaaggctgctatt
aaggaagttgagatgggaggtgatgagtactcacttttggtcaatttaaagcggcttaat
gagtttcaactgactaaatttgtgcccgttgatagcttatatggagatatgagtagcatt
ctcaagcttttgagagacatcgacaatgaggtaaagtgttttctgcttctcaacatgtac
ctccatgtagcctggtctctgacgttcattgatgttgaaagtcctgagtcatctattaat
gaattattatctaagagagctacactgtttgagcaactagaatgcttcataaatgaactg
cctaatgctccacaggagggtaggattggaaatctactgtcatacagagtgtgtgtcata
ctagcagacctatggtgcttatttgaaaattctagattttcttctactaaactgcatcga
ttaggatatcacccagatatatcctcagttgaaaagttttggaaactttctcagcagttg
cttagcatttcagatgagaccgaagaagaggattcaaacgaagaatacattgaggataca
aacagggatgtggttatgattgccgctgctaagttggtcatacatagagttactaaggac
tatcttgcggctgagattatttcacattttgtgatgcatggagcaagcatcacaaatata
atcaagaatttcattacttctctaagaaaaactgcaaaagatgagatgccttctatattt
tttgaggcattgaaaaaaacatatcagaggcaagcattgggtaatgagtctttggcaagc
aacacatactcggattgtaaggatctttcttctcggctctcagcaacatttggtggtgca
gcacgaaataaacataagtgggagattttgaaaatcatcaaggatggtatttcatatgcc
ttttctgatgctccgaaacacttgtcatttctagaggttgctgttctaccatttgtcaca
aaacttcccatatccgatcttctagagatactgaaagatgtgcaaaagagatcagacaag
gtaaacataaatgaagatcctagtgggtggcgaccctattcagtgtttgtcgagtactta
caggaaaaatgtgcaaaaaatgatctgcaagatgagaaagagggaaacctcccaaagcgg
agaggccgtccaagaaaggcaatgaatgtagaaggaaagagactttttgatggtcatgaa
tcaagtgaagaagattctattagtggttcagagcaggatgatcaagatgaagaggaggat
gaagaagctcagcagcctttgatacacacgtttagagcttcggcttccaaattgagatca
atgagagttgcacagccagatagtagtgctcgccaagctggatctggaagaaccacaggt
acggaccactaa
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