Zingiber officinale (ginger): 122019790
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Entry
122019790 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3-like
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122019790
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122019790
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
122019790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
122019790
NCBI-ProteinID:
XP_042433244
LinkDB
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Position
9A:119232257..119241764
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AA seq
625 aa
AA seq
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MVDREDEDFQMALRMSLQSLPPEAKRSKPLEIAEESLEARNRRLQRELMASAAEKRMKAS
ESEAAGNKSGSPSKPASASVVGDTKAVSMASVAGEQASSTHLGKFKEGEGMRLGSCEALS
SADAEKLFTLVFGNCVSRDVLAQWSNQGIRFSPDPETCMGLVQEKGGPCGVLATIQAYVL
KYLLFFSDNFSKIDVNKPLYELGRNKLYQNSQTASNNFASITEDRKQRALVYSMAEILFL
CGNGKQAVVATIGVNCHDWEGSEDDQSELMLAKALKDLSVATASDLQKFLRISAYNSQET
AIHQLLIALPVFQSRMGALLFLISALLSRGLEFIQADRDDPSLPLVTAPFGHASQEIVNL
LICGEAVPNVFDGRMDVGGGMFLKGVAMTPEIGFLSLLESLNLCKVGQHLKSPRWPIWVV
GSESHYTVLFALDSAVQEENELEERESKIRKAFDAQDQSGGGGFIGVEGFQQVLREGNID
FPPAKIDHLCSSGVIVWSELWHALLELDKSYGGLKDSSGLMGKKLFDLYHFNGIAKSVSN
TTAVGGESPLQKPRLCKLSVVVPPRWTQEEFLADVVSSSSNDPSVRDTGILELNQPPQHA
PLVDCIRTRWPRAMCSWIGDAPSIV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcgcgaggacgaggactttcagatggcactgcgaatgagcctgcagagcttg
ccaccggaggcgaagcggagcaagccgttggagatagcggaggagtcccttgaggcgagg
aatcggaggttgcagcgcgagctcatggcgtcagctgcggagaagaggatgaaggcctcc
gagtccgaggctgctggaaataaaagtggtagcccttcaaagcccgcgagtgcgagcgtg
gtcggggacactaaggccgtctcgatggcctcagtcgcaggggagcaggccagcagcacg
catttagggaaatttaaggaaggagaaggcatgcgtttaggttcttgtgaggctctctcg
tcggcagatgccgagaagctgtttaccctggtgttcgggaattgcgtttcgagagatgtt
ctggcacaatggagtaaccagggaatcagatttagccccgatccggaaacttgcatgggc
ttggttcaagagaaggggggtccttgtggtgtattggccaccattcaggcttatgttttg
aagtatctactgtttttctcggacaattttagtaaaatagatgtcaacaaaccactatat
gaactaggtcggaacaaactttatcaaaattcacaaacagcaagcaacaattttgcatct
attactgaagacagaaaacagagagcactggtttacagtatggccgaaatattgttccta
tgtgggaatggtaaacaggctgtggtggcaaccataggggttaactgccatgattgggag
ggctctgaggatgatcaaagtgagttgatgttagcaaaagctctgaaagatctctctgtt
gcaacggcttcagacttgcagaaatttttaagaattagtgcatacaattcacaagaaact
gcgatacatcaactactaattgcacttccggtgtttcaaagccgtatgggagcgctgttg
ttccttatatctgctctactttcacgagggctggagttcattcaggcagacagagatgat
cctagcctacctttggtcacagctccatttggccatgcctcgcaggaaattgtgaatctg
ctgatttgtggagaggctgtgcccaatgtatttgatggccgaatggatgttggtggcggt
atgttcctgaaaggtgtagccatgaccccggagattggattcctttcacttctagaatct
ctcaacctttgcaaagttggtcagcatctaaaatcccctagatggcccatatgggtagtg
ggtagtgagtcccactacactgttctttttgctcttgattctgctgtgcaagaagagaac
gagctggaagagcgggagtcaaagattaggaaagcatttgatgcccaggaccaaagtggt
ggtggagggtttattggtgtggaaggatttcaacaagttctcagggagggtaacatcgat
tttccacctgcaaagatagatcacctctgcagttcaggggtcatcgtatggagtgaatta
tggcacgctttgctagaattggataaaagttatgggggcctcaaggactcatctggatta
atgggcaagaagctgtttgatctttaccatttcaatggtattgcaaaatcagtatcaaac
actactgctgttggcggcgagagtcccctgcagaagccaaggctttgtaaactgagcgtt
gtagttccacctcgatggacgcaggaagagtttttggccgatgtggtgagtagctcaagc
aatgatccaagtgtgagagataccggcatcctcgagctcaatcagcctcctcagcatgca
ccactagtcgactgcatcagaacgcgatggccacgagctatgtgcagctggattggagat
gccccgagtattgtgtaa
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