Zingiber officinale (ginger): 122019819
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Entry
122019819 CDS
T08725
Name
(RefSeq) two pore calcium channel protein 1
KO
K16900
two pore calcium channel protein, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122019819
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
122019819
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GFIT
Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122019819
NCBI-ProteinID:
XP_042433296
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Position
9A:complement(132760619..132818898)
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AA seq
748 aa
AA seq
DB search
METPLIAEEGRGFASGLTAAFSSRRRQQSGVHQRRRSFFSRDDALTLGDNYQKAAALVDL
ADDGVGLPEEILNDKRFEKAAKFYFIYIRLDLLWSLNLFAIVVLNFLEKPLWCQKNGSDV
CVERKYYFLGQLPYLNERQSLTYEGITLLILTIYNLFPLAYEGLHRYWENNLNKLKVVLL
LVLVCDMLVYSLCLSNVLIFLLPLRVAPYVRIIFVILSVRHLYGCMLTLAGMAGTYLNIL
ALSTLFLLFSSWLAYVIFEDTEQGESMFTSYGTTLYQMFVLFTTSNNPDVWVPAYKSSRW
SCIFFVLYILLGVYFLTNLILAVVYDSFKNQLAKQVFQMDLMRKNILEKAFNLINVSGYL
NKQQCSHLFEELNEYRSLPKISKEDFELIFEELDDSGDFKINLEEFTDLCNAIALRFQRE
AVPSWFENYPTFYRSRPCEMLKAFVRSTTFANIVGFVLIINLVAVVIETTLDIQNSSAQK
FWQEIEFFFGWIYVLEMALKIFSFGFDAYWMDGQNQFDFVITWTIVIGETLTFASPSTFP
FLLNGEWIRYLLIARMLRLLRLLQHVKQYKAYVTTFLTLIPSLMPYLGTIFCVLCIYCSL
GVQLFGGIVNAGNTELASTDLSDSDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYSEL
TGTYWTLIYFISFYLITVLLLLNLVVAFILEAFFAEMDLESANEPNEDAPERKGRRRLTG
ASSRNRTVDILLHRILSAELEESQNAEA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagacgccgttgatcgcggaagaagggaggggattcgcgtctggcctcacggctgcc
ttctctagtcgaagacggcagcagagcggcgtccaccagaggcgcaggtcgttcttctcg
agggacgatgccttaaccttgggagataactaccagaaggccgcggctcttgtggatctg
gcagatgacggtgttggtcttccagaggaaattttaaatgacaaaagatttgaaaaagct
gcaaagttctacttcatttacattcgcttggatttgctatggtcacttaatctttttgcc
atagttgtactcaactttcttgagaaaccgctatggtgtcaaaagaatggcagcgatgtt
tgtgttgaaaggaagtattatttccttggacagctgccttatctaaatgaaaggcagtcc
cttacttatgaggggataacacttctcattctcacaatttataacttgtttccacttgct
tatgagggtcttcatcgttactgggagaacaatttgaacaagttaaaggtggtgcttttg
ttagttttagtttgtgatatgctggtatattctctctgtctctcgaatgtgctcattttt
ttattgcctttgagagttgcgccctatgttcgcataatctttgttattttatcagtcagg
cacttgtatggatgtatgctaacactagctggaatggctggcacataccttaatatcttg
gctctttccacgttgttcctcttgttttccagctggttagcttatgtaatatttgaggac
acagaacagggggaatccatgtttacttcctatgggaccacattatatcagatgtttgta
ttgttcaccacatcaaacaatccagatgtatgggttcctgcctacaagagttcacgttgg
tcttgcatattttttgttctttatattctgctgggtgtctatttcctcacaaaccttatt
cttgctgttgtttatgatagcttcaagaaccagcttgcaaaacaagtttttcagatggac
ctaatgagaaaaaacatcttggaaaaggcattcaatcttataaatgtttctggctatttg
aacaagcaacaatgtagtcatctatttgaagaattgaatgaatatcggtctttgccaaaa
atttcaaaagaagattttgaattgatattcgaggagcttgatgacagtggtgatttcaag
attaatttggaagagttcactgatctttgcaatgctattgcattacggttccaaagagaa
gctgtaccatcatggtttgagaactatccaacattttaccgatcacgtccgtgcgaaatg
ttaaaggcatttgttcgcagcacaacatttgctaatattgtggggtttgtgcttataatc
aacctagttgctgttgtaattgaaacaacgcttgacatacagaacagttctgctcaaaaa
ttttggcaagaaattgagtttttctttggatggatttacgtattggagatggctttgaaa
atcttttcctttggctttgacgcttattggatggatgggcaaaatcaatttgattttgtg
attacatggacaattgttataggagagactttgacttttgcctccccgtctacgtttcct
tttcttttgaatggagaatggattcgctaccttttgattgctaggatgctaagattattg
aggcttctgcaacatgtcaagcagtacaaagcatatgtgacaactttcctgactcttatt
cctagtttgatgccataccttgggactatattttgtgtgctatgcatttattgctcactt
ggagtacagctttttggcgggattgtaaatgctggaaacactgaactggcgtctacagat
ctttctgatagcgactatttgctttttaatttcaatgattacccaaatgggatggtaaca
ctgtttaatttgctcgtgatgggaaattggcaagtatggatgcagagctacagtgaattg
actggaacatattggacacttatatacttcatcagtttctacctaataacagtcttgctg
cttcttaatttggttgttgctttcatattagaggcgttctttgctgaaatggatcttgaa
tcagccaatgaacctaatgaggatgcgcctgaaaggaagggaagacgacgacttactggt
gcaagctcgagaaaccgcacagttgatatcctcctccatcgaatactaagtgccgagcta
gaggaaagccagaatgctgaagcatag
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