Zingiber officinale (ginger): 122019895
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Entry
122019895 CDS
T08725
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122019895
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122019895
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122019895
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122019895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
122019895
NCBI-ProteinID:
XP_042433436
LinkDB
All DBs
Position
1A:16364742..16366701
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AA seq
552 aa
AA seq
DB search
MDVVLTGAAIAKRLASCNRVTRERAVRAFSSWICHQANDAVSDADLIKIWKGLFYCFWHA
DKLPVQSELAGRLAALVETLPPPLAFRYFEAFLVTIRREWGGIDFLRLDKFYLLIRKFLR
HAFLLLKKKAWDPALVGSMMGILLEKSLLASDNYLANGVKYHVSEAFLDETNDLLPLVVN
TLELVIKPFILVLEKTADKVLVNKIKVNIFDRFLENGRKLLNPMKTEDQLELNSEEEKLS
KIALLLAFSKMFFDAASASETLQGNRKFLFNLHEGFLKLENDLEKYGVHISAKYLDSGCS
QDVTCRMVIESTEQVDVKNEDTEGAPDDKQTKKRKKPKASSDADKKKKNKSGKKNSLDSV
TESHVVKTTSEIDDVVSAKNSDGDMMGTHEMIDFDESVISNLQRQFEKAAAEAGILIGSD
QSSASPATPVASTGVKKRKRTKAISAGANENGNSANCDSTTGKSVKKVRFSMKSNLVWKP
NSPMPPQSLRLPPSATPKGSALKKGVPPGPLKETLPTVKKMKGKASSVKKIRIGVKSPSA
IKRLRKLQGLTV
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgtccttaccggcgccgccatcgcgaaacgtctagcgtcttgcaacagggtt
acacgggagcgggctgtccgtgccttctcatcgtggatctgccaccaagctaacgacgcc
gtttcggatgctgatctgatcaaaatatggaaaggcctgttctactgcttctggcacgca
gataagctccctgtccagtccgaactcgccggtcgccttgctgctcttgtcgaaaccttg
cctccgccccttgccttccgatacttcgaggctttcctcgtcaccatccgacgggagtgg
ggaggcatcgacttcctccgcctcgacaagttttatcttcttattaggaagttcctgcgg
catgctttcttgctgctgaagaagaaagcgtgggatcccgccctcgtaggcagtatgatg
ggaatattgttggaaaaatcgcttcttgcatccgataattacttggccaatggggtcaag
taccatgtttcggaggccttcttggacgagacgaatgatcttcttcctctcgtcgtgaac
acactagaattggtgataaagcccttcattttagtgctggagaaaactgcagataaggta
cttgtgaataagattaaggtaaacatttttgaccggtttctggagaatggaaggaagttg
ctgaatccgatgaaaactgaggatcaattggaattgaacagtgaagaggagaagctcagc
aaaattgctttgctcctagcgttttctaagatgttctttgatgcagcttcagcttctgaa
actctacagggaaatcggaaatttttgtttaatttgcatgaaggttttctcaagttggag
aacgatttagaaaagtatggagtgcatatctcagccaagtacttggatagtgggtgttca
caggacgtgacttgtagaatggtgatagaaagcaccgagcaggttgatgttaagaatgaa
gacaccgaaggtgccccagatgacaagcaaactaagaagaggaagaaaccaaaggcatct
tcagatgctgataaaaagaaaaaaaataagtcaggtaaaaagaattctttggattctgtc
acggagagtcacgttgtcaaaacaactagtgaaatcgatgatgtagttagtgctaagaat
tcagacggggatatgatgggaacccatgaaatgattgattttgatgagtctgtgatttca
aacctgcagagacagtttgagaaggctgctgctgaagctggcattcttattggtagcgat
caatcaagtgcttcaccagccacacctgttgctagtactggtgtaaagaagaggaaaaga
acaaaggctatatctgctggtgccaacgaaaacggaaatagtgctaactgtgatagtact
actggaaaaagtgttaagaaggtaaggttttcgatgaagagtaacttggtctggaagcca
aatagccctatgcctccacagagcttgagattacctccatcagctactccaaaaggtagt
gctcttaagaaaggcgttccacctgggcctctcaaggaaacacttcctacagttaaaaaa
atgaaggggaaagcaagctcagtaaagaagattaggattggtgttaagagtccttcagcc
atcaaacgccttcgcaagctgcaaggtcttactgtgtag
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