Zingiber officinale (ginger): 122019904
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Entry
122019904 CDS
T08725
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22-like
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122019904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122019904
03110 Chaperones and folding catalysts [BR:
zof03110
]
122019904
Enzymes [BR:
zof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122019904
Spliceosome [BR:
zof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122019904
Chaperones and folding catalysts [BR:
zof03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122019904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
122019904
NCBI-ProteinID:
XP_042433457
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Position
9A:135436690..135443256
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AA seq
208 aa
AA seq
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MASGGAASTINSNSNSNSSVVVASAAPAVEWHLRPPNAKNPIVFFDVTIGSIPAGRIKME
LFADIVPRTAENFRQFCTGEYRKANLPIGYKGCQFHRVIKDFMIQGGDFLKGDGSGCISI
HGSKFEDENFIAKHTGPGLLSLANNGADSNGCQFFITCAKCDWLDNKHVVFGRVLGEGLL
VVRKIENVATGPNNRPKLACVIAECGEM
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggcggtgctgcctccaccatcaacagcaacagcaacagcaacagcagcgtt
gtggtcgcctctgccgcacccgcggtcgagtggcacctgaggcctcccaacgctaagaat
cccatcgttttcttcgacgtcaccatcgggtccatccccgccggccgcatcaagatggaa
ctcttcgctgacatcgtcccgaggacggccgaaaacttcaggcaattttgcactggagaa
tacagaaaagcaaatttaccaattggttacaagggatgccagttccatcgagtaattaag
gactttatgattcaaggaggtgattttctcaagggtgatggaagtggctgtataagtatc
catggaagtaaatttgaagatgaaaattttattgcaaagcatacgggccctggtttgctt
tctttggcaaacaatggggcagatagtaatggatgccagttctttataacatgcgcaaaa
tgtgactggctagacaacaagcatgtagtctttgggagagttctaggagaagggctcttg
gttgtcaggaagatcgagaatgtggctacaggaccgaacaatcgcccaaagcttgcttgc
gtgatagccgaatgcggagaaatgtag
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