Zingiber officinale (ginger): 122019915
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Entry
122019915 CDS
T08725
Name
(RefSeq) homeobox-leucine zipper protein ROC2-like
KO
K09338
homeobox-leucine zipper protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122019915
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
122019915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
Motif
Other DBs
NCBI-GeneID:
122019915
NCBI-ProteinID:
XP_042433473
LinkDB
All DBs
Position
9A:complement(35783196..35787266)
Genome browser
AA seq
724 aa
AA seq
DB search
MYMQSIKVLRESCGLEFPRIDAKLQFIDMTEEHEQEEQQNGILNRSIMMDPLFRGILDDD
DHFPNVLDINTLAASNVEQGVQNHGKRKINYRHTTEQIQQLEAFFREFPHLDDKQRKELG
QKLGLDPMQVKFWFQNKRTQMMNQLEREENQRLREENDLLLSDNLKLKEALNSACCPNCG
GPPSLGEISIDEQQLLAENSRLRKQIERITAMVAKRTGVQLIPFQELNLPATVAGVHPRP
GSTSNNKNVPEFGKLAAAALAELAMAELLALAQLGEPMWVRGPDGLTEDLNQAEYVRAFA
NGLGPKSVNLATEATRATAIVAMPVEALVGMLMDVEKWIAFFSGIVTGAATVEVYATGAA
AGSYDGALQLMTAELQVPSPLVPAREGLFLRHCKQPEGARWAVVDVSFEVRHDTMAKFRR
RPSGCIIQETPDGRSKVVWVEHVEADHGDVHALYKAIVNSGLAFGAKRWLARMERQCERL
SSVTNSTAHIGNVEMTHNILNLSERMAMSFCSGVSGSLIHQWAQVTGAATNDVRIRSRKN
NGDPGRPAGTVLSASTSIWLPISPKRVFDFLRSVPSRSQWDILLHGAMVYEAAAAILSSL
EEDNCVSILAVGLPGEGNTTMILQETRSDSTCKYIIYSPVEAAMVNAVLGGEDSNSVALL
PSGFAILPDEISGRGGSLLTVALQIFIDSSPGSEIISGSIDVVNSLLSCTCDRIRAIMPS
SNVQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgcagtccattaaggttcttagggagagttgtggccttgaattcccaaggata
gatgcaaagttgcaattcatcgacatgactgaggaacatgagcaagaagaacaacaaaat
ggaatactaaatcggtcaataatgatggatccattgtttcgtggcattcttgacgacgac
gatcacttccccaatgtcttagatatcaatacgctggccgcatccaatgttgagcaaggt
gttcaaaaccatggaaaaagaaagatcaactatcgacatacaacagagcaaattcaacaa
ctcgaggcgttcttccgagaattccctcatctagacgacaaacaaaggaaggagttaggg
caaaaactcggattagacccaatgcaagtgaagttttggtttcaaaacaagaggacacaa
atgatgaaccaactcgagcgagaggaaaaccaaaggttgagggaggagaatgatcttctc
ctatcggacaacttgaagttgaaggaagcactcaacagtgcttgttgtcccaactgtggc
ggcccgccctcactcggtgagatctctatcgacgagcaacaactactagccgaaaacagt
cgtctacgcaaacagatcgaaaggatcactgcaatggtcgcaaagcgaacaggggttcag
ctgattccgttccaagaactaaacctaccggcaactgtagctggagtccatcctagacca
ggttcaacttcgaacaataagaatgtgcccgagtttgggaaactggctgctgccgctttg
gctgagctagccatggcggagcttctcgcactagctcagctcggcgaaccgatgtgggtt
cgagggcccgacgggctcaccgaagacttaaaccaggccgaatatgtccgagcttttgca
aatgggctcggacccaagagtgtgaacctggctacagaggccacccgggctaccgcaatc
gtggccatgccggttgaggcactggtcggcatgctcatggacgtggagaaatggattgcg
ttcttctccggcatcgtcaccggagcagccaccgtggaggtgtacgccaccggagcagca
gcaggaagctacgatggcgctctgcaactgatgacggccgagctgcaggttccgagcccc
ctcgttccggcgagggagggcttgttcctgaggcactgcaagcagccggagggagcgcgc
tgggccgtggttgacgtttccttcgaagtgcggcacgacaccatggccaagttccgccga
aggccctccggatgcatcatccaggaaacacctgacggtcgctcgaaggtcgtatgggtc
gagcatgtcgaagcggaccatggagatgtccatgcgctgtacaaggccatcgtcaactcc
ggccttgccttcggagcaaaaagatggctggcgagaatggagaggcagtgcgagagatta
tcgagcgtcaccaattccactgctcatatcgggaacgtcgagatgacccataacatacta
aatctatcggagaggatggcgatgagcttctgcagcggtgtcagtggctctctgatccac
cagtgggctcaagtaactggtgctgccacaaacgatgtgaggatcaggagcaggaagaac
aatggagatccagggagacctgctggcactgtgctcagtgcaagcacttcaatctggctg
ccaatctctccaaagagagttttcgatttcctgcgcagtgtgccatcgcgtagccagtgg
gacattttgctgcatggagccatggtctacgaagcagcagcagccattttgagcagcctg
gaagaagacaactgtgtctccattttggcagttggactccctggcgaggggaacacgacg
atgatactacaagagacccggagtgactcaacttgcaaatacattatctactctcctgtt
gaggctgccatggtcaatgcagtgcttggtggcgaggactccaactctgttgcacttctg
ccttcaggatttgccatactccctgatgagatctctggacgtgggggttctcttctcact
gtagctcttcagatctttatcgactcgtctcctggttccgagatcatttctggatccata
gatgtagtgaacagtcttctgtcctgcacctgtgacagaataagagccatcatgccatcc
agtaacgttcagtag
DBGET
integrated database retrieval system
