Zingiber officinale (ginger): 122019924
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Entry
122019924 CDS
T08725
Name
(RefSeq) protein AAR2 homolog isoform X1
KO
K13205
A1 cistron-splicing factor AAR2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122019924
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122019924
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Gene cluster
GFIT
Motif
Pfam:
AAR2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
122019924
NCBI-ProteinID:
XP_042433491
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Position
9A:5107916..5115907
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AA seq
380 aa
AA seq
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MDQETALDLVKKGSTVLLLDVPQFTLLGIDTQMFSVGPMFKGIKMIPPGIHFIYYSSSNK
EGNEFSPMVGFFISTRSAEVVVRKWNPSEERYSEGVRCLEFDSHLGPYVLNQYGEWKQLS
NYITESTIEKIEPIGGDITIAYESGLIEVPKTAMEKQLIEQLKSNTFSKLEREEHYKHGC
YYTPIPNSVNHKGISAEELTAINLDKTKLLEKILIKDYGGEEDSLLGELQFSFVAFMMGQ
SLEAFKQWKSFVILLFSCIEAPLKTRTRLFSKFIKVIFHQLNHGFQRNKNHSNNTGKEIS
LFLDEAWFSKEIFLFRLCKDFFPLVLDSSVVDGDLPYWVRTLSSRTRKLKVLLETALGWD
FADDEDDEFSPVIVPCDEVN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaaaccgctctcgatctcgtgaagaagggctcgactgttctcctgctcgat
gtcccgcagttcaccctcctcggtatcgacacccagatgttctccgtggggccaatgttt
aagggtatcaagatgatcccaccagggatccactttatctactatagttcctcaaacaag
gaaggcaatgaattttctccaatggtcggcttcttcattagtacaagatcagccgaggtg
gttgttcgcaagtggaacccttcagaagagcggtactctgaaggagttagatgcttggag
tttgattctcatcttggtccttatgttttaaatcaatatggggagtggaaacagctttct
aattacatcactgagagtactattgagaaaattgagcccattggtggagatattacaata
gcctatgagtctggattaattgaagttcctaaaactgccatggagaaacaattgattgag
caactaaagagcaatacgttttcaaaattagaaagagaggaacattacaaacatggatgc
tactacacgcctattcccaattctgtcaatcacaagggcatctctgccgaggaacttaca
gcaattaaccttgataaaacaaagttgctggaaaagatattgatcaaagattatggaggt
gaagaagattcactcttgggggagctacaattttcttttgttgcctttatgatgggacaa
tcactagaagcctttaaacagtggaagtcttttgttatccttctattcagctgcatagaa
gcaccacttaagacaagaactcgtttgttctccaagtttatcaaagttatcttccaccaa
ctgaaccatggatttcagagaaataaaaatcattcaaacaatacgggaaaggaaatatcc
cttttcttggacgaggcatggttctccaaggaaattttcttatttcgcctttgcaaggat
ttcttcccgttggtattggattcttcagttgttgatggtgacttgccctattgggttcga
actctttcttctcgtacgagaaaactgaaggttctacttgaaactgcacttgggtgggat
tttgcagatgacgaagatgatgagttctcccctgtaattgtaccttgtgacgaagtgaat
taa
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