Zingiber officinale (ginger): 122019944
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Entry
122019944 CDS
T08725
Name
(RefSeq) heat stress transcription factor A-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122019944
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122019944
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
MIC19_MIC25
APG6_N
Rv2743c
Motif
Other DBs
NCBI-GeneID:
122019944
NCBI-ProteinID:
XP_042433531
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Position
9A:complement(95650500..95654450)
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AA seq
520 aa
AA seq
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MVGGGMEDNSGGRGGGGQAAIGEKETAAGANPGLNGNAPPPFLSKTYDMVDDPATDAIVS
WGAGNNSFVVRDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRG
QKHLLKTINRRKPSHGHGQSQKEQPQPQLQPQPQPQPQSAPATACVELGKFGLEEEVEQL
KRDKNVLMQELIRLRQQQQTSDHQLQTLMKRLQGMEQRQQQMMAFLAKAMQSPGFFPQFV
QQNQNDSNRRITGVNKKRRLPKQGDSHDDEMLEGQIVKYQPLINEAAKAMLRQIIKMNAS
ARLESFGNSDNLQLENFQIPSEAFESTASQNSCVTLSEIPSNSGFPFVPTASAVSDQSSA
VANEMIGPDDIGVLSVVPEEIAPSPTNIDIPDLPELLGIDPEDNVADIPVETLEMPKPQD
MYANQNASVLQEVGPLDIDGFSADTDINLFNDEEKLPGIIDDFWEQFLMASPLAVDTEEV
ESTTQEQMEVQPSADNVWNNTEHMNHITEQMGLLSSAPKL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggttgggggcggaatggaggataacagtggcggtaggggaggtggagggcaggcggcg
atcggtgagaaggagacggcggcgggggcgaatcccggactaaacgggaatgcgccgccc
cctttcctcagcaagacttacgacatggtggatgatccggcgaccgacgcgatcgtatcg
tggggcgccggaaataacagcttcgtcgtgagggatccgccggagttcgccagggatctc
ctgcccaagtacttcaagcacaataatttctctagctttgttcggcagctcaatacttat
ggttttcggaaagttgatcctgatcgctgggaatttgcgaacgagggatttttaagaggg
caaaagcacctgcttaaaactatcaacaggaggaaaccctctcatggacatgggcaaagt
caaaaagagcaaccacaaccgcaactgcaaccacaaccacaaccacaaccacagagtgct
ccagctactgcttgtgttgagttgggcaagtttgggttggaagaagaggttgagcagctg
aagagagataagaatgtactcatgcaagagcttattaggttgcgccagcagcagcaaacc
tcagaccatcagttacagacattgatgaaacgcctccagggaatggaacaacgtcaacaa
cagatgatggcattcctcgcaaaggccatgcagagccctggtttctttccgcaatttgtg
cagcaaaatcaaaatgatagcaacagacgcattactggagttaacaagaagcggaggctg
ccaaaacagggagatagtcatgatgatgagatgctcgaaggtcaaatagtgaagtaccaa
ccactgatcaatgaagcagccaaagcaatgctaagacaaattataaagatgaatgcatct
gctaggttggaatcttttggaaattctgataatcttcaactagagaacttccaaattcca
tctgaagcatttgaaagcacagcaagtcagaattcttgtgttactttgtcagagatccct
tcaaattctggctttccatttgttcctactgcctctgcggtatctgatcagtcttctgca
gtagctaatgaaatgattggaccagatgacattggagtgttatctgtagttccagaggaa
attgctccatctccaactaacattgacatcccagatctccctgagttactcggaatagat
cctgaagacaatgttgctgatattccagttgaaactttggaaatgcccaagccacaggac
atgtatgctaaccagaatgcctcggtcttgcaagaagttggacctttagatattgatggt
ttttcagcagatactgacatcaacctgttcaatgatgaggagaagctccctggcattatc
gatgatttctgggagcaattcctgatggctagccccctcgcagtagacacagaggaggtt
gaatccaccacccaggagcagatggaggttcagccaagtgcagacaatgtgtggaacaac
actgaacacatgaatcatattacggagcaaatggggcttctttcatcagctcctaagctt
tga
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