Zingiber officinale (ginger): 122019965
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Entry
122019965 CDS
T08725
Name
(RefSeq) SWR1-complex protein 4-like
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122019965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122019965
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
122019965
NuA4 complex
122019965
Chromatin remodeling factors
SRCAP complex
122019965
SWR1 complex
122019965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
DMAP1
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF7185
Motif
Other DBs
NCBI-GeneID:
122019965
NCBI-ProteinID:
XP_042433567
LinkDB
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Position
9A:134924680..134961867
Genome browser
AA seq
457 aa
AA seq
DB search
MDAKDILGLPKNSFPGAQEKKTRPQKDSQRKPDGIHREVYALTGGMAPLMPTIEISHLKK
RQYSEKEEKISWQWLPFTSSARPDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDVLKYTD
EEYEKHLTDPTWSKEETDQLFDLCKRFDLRFIIIADRFPFPQTRSVEELKNRYYSVTRAL
LLARAPSSTDVSGHPIVKEPYNMTHEVERKRALSAVLSQTRQQEQKEAEILAEAKQIMES
RMASKVNMTHSAEEVELPDNQIGNEGAEAAAHDESALPSPNIHLSSSAATPPIATVECTS
TPASLRMLRVYLRTHALDQMVQAANSTAGLRTIKRVDQTLQDLGVHLKPKVPTKSVCAEH
LELRKEILTLLNLQKQLQNREAEATANRDNTYAEASSTPKRAYRGDAERTIVPDSLGFGG
DRVSKRDHKRKVPGRFMDAPPSPPQSKRPRKLKSSDG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaggacatcctcggccttcccaagaactcattccctggtgctcaggagaag
aaaacccgtcctcagaaggattcccaaaggaaacccgatggcatccatcgggaggtttat
gctcttacaggagggatggcaccgcttatgcccacgatagagatctcccacttgaagaaa
cgacaatattcagagaaagaggaaaagatttcttggcaatggcttccttttacatcttct
gctcgaccagataacttgcaactgtatcattgggtaagggttgtaaatggtgttccacct
acaggtgattactcattcgctaaatacaacaagtctgtggatgttctcaaatatacagat
gaggaatatgaaaagcatttaactgatcctacgtggagcaaggaagaaacagatcagcta
tttgatctttgcaaacggtttgatcttcgtttcatcattatagcagataggtttccattc
cctcagactcggagtgttgaagaacttaagaatcgctactattctgtgactcgagcactg
ttgcttgctagggcaccttcttctactgatgtttctggacatccaattgttaaggaacct
tacaatatgacacatgaagttgagcggaaacgtgcactgtctgcagtgctttctcaaaca
agacagcaagagcagaaagaggcagagatccttgctgaagctaaacaaataatggagtca
cgcatggctagtaaagtgaatatgacccatagtgcagaagaagttgaattgccggacaac
caaataggtaatgaaggtgcagaggctgctgctcatgatgaatctgcattgccatcgcct
aacattcatctgtcatcttcagctgctacaccaccaatagccacagtagaatgtacctca
actccagcttcacttcgcatgcttcgtgtatatttgagaacacacgcgcttgaccagatg
gtgcaagctgcaaattcaactgcaggcttgaggaccatcaaaagggttgatcagacactc
caagatctaggggttcatctgaaaccaaaggttccaactaaatcagtatgtgcagaacac
cttgaattgagaaaagagatactaacactgctcaacctacaaaaacagctgcaaaataga
gaggctgaagctactgcaaaccgagacaatacatatgctgaagcatcaagcactcctaag
cgtgcttatcgtggggatgctgaacgaactattgtccctgattctcttggtttcggaggt
gatagagttagcaaacgtgaccacaaaaggaaggttcctggaagattcatggatgcgcca
ccatcaccaccacaatctaaacggcctaggaaattgaagtcttccgatggataa
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