Zingiber officinale (ginger): 122020062
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Entry
122020062 CDS
T08725
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122020062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122020062
04147 Exosome [BR:
zof04147
]
122020062
04090 CD molecules [BR:
zof04090
]
122020062
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122020062
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122020062
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122020062
CD molecules [BR:
zof04090
]
Proteins
122020062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_30
DUF87
AAA_14
RsgA_GTPase
AAA_19
Zeta_toxin
AAA_15
NB-ARC
Motif
Other DBs
NCBI-GeneID:
122020062
NCBI-ProteinID:
XP_042433726
LinkDB
All DBs
Position
9A:3389259..3396573
Genome browser
AA seq
1249 aa
AA seq
DB search
MENVHREEEDEEGKASGGGGNNSIKETKNVPFLKLFSFADNWDYALMAFGSLGACVHGAS
VPVFFIFFGKLINIIGLAVLFPTSVSHRVAMYSLDFVYLGIAILFSSWAEVACWMHTGER
QAAKMRLAYLRSMLEQDIALFDTEASTGEVIAAITSDIIVVQDAISEKVGNFMHYISRFI
AGFAIGFASVWQISLVTLSIVPLIAIAGGIYAYIATGLIARVRKSYVKAGEIAEEVIGNV
RTVQAFVGEEKAVKLYRSALINTYKYGRKGGLAKGLGLGSMHCVLLLSWALLVWFTSIVV
HKNITNGGESFTTMLNVVIAGLSLGLAAPNISTFLRARTAAYSIFEMIERNTVNKVSAKT
GRKLHSVNGHIKFANVQFSYPSRPDVLIFSGFNLDIPSGKIVALVGGSGSGKSTVISLIE
RFYEPLSGEILLDGHNIKDLDLRWLRQQIGLVNQEPALFATSIRENILYGKDDASLDEIT
HAAKLSEAINFINQLPERYDTQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSAL
DAESEKSVQEALDRVMIGRTTIVVAHRLSTIRNADIIAVVQGGKIVETGTHEQLIVEPSS
VYASLIKLQESASQHRPLLSDGATMGRPLSIKYSRELSGGHTSFGTSFRSDKESVTRYGP
EGNDLTKTKAVSMKKMYSMVSPDWMFGLFGTIGAFVAGAQMPLFALGVTQALVSYYMGWE
VTQREIKKIALLFCGGSVVTVIFHVIEHLNFGIMGERLTLRVRERMFGAILRNEIGWFDD
VSNTSAMLSSRLETDATLLRTIVVDRSTILLQNVGMLVTSLIIAFILNWRVTLVVLATYP
LMVSGHISEKLFMRGYGGNLNKSYLKANMLAAEAVSNIRTVAAFCSEQKVIDLYLNELKE
PSKRSFRRGQAAGIFFGVSQFFLFASYGLALWYGSVLMGKGLASFKSVMKSFMVLIVTAL
AMGETLALAPDIIRGNQMVASVFELLDRKTEVPSDVGEDVGKVEGAIEMKGVQFCYPSRP
DVVIFRGFDLRVKAGKSMALVGMSGSGKSTVLALILRFYEATAGKILIDGKDIKKLKLKE
LRKHIGLVQQEPVLFATTIRENILYGKDGASEAEIVEAAKLANAHAFISALPDGYSTKVG
ERGIQLSGGQRQRIAIARAIIKNPAILLLDEATSALDVESERVVQHALDRVMKSRTTIMV
AHRLSTIRNADVISVLEDGKIIEQGSHSSLVEKKDGAYFKLISLQQQKQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgtccacagggaagaagaggacgaagaaggcaaagccagcggcggcggcggc
aacaacagcattaaggagaccaagaatgtgccgttcctgaagctcttctccttcgccgac
aactgggactacgcgctgatggccttcggctccctcggcgcctgcgtccacggcgcctcc
gtccccgtcttcttcatcttcttcggcaaactcatcaacatcatcggcctcgccgtcctc
ttccccacctccgtctcccatcgcgtcgccatgtactcgttggacttcgtgtatctgggc
attgcgatcttgttctcttcatgggcagaggtggcgtgttggatgcacaccggcgagaga
caggcggcgaagatgaggctggcttatctccggtccatgctggagcaggacattgctctg
ttcgacacggaggcgtccaccggcgaagtcatcgccgccatcaccagcgacatcatcgtc
gtgcaggatgccatctccgagaaggttgggaacttcatgcactatatcagcagattcatc
gccggtttcgcaattggttttgccagcgtctggcagatcagtctcgtcacactgtccata
gtgccactgatagccattgccggtggaatctacgcatacattgccaccggtctcattgct
cgagtcagaaaatcgtatgtcaaggctggagaaatagctgaggaggtgattggtaatgta
cggacagtgcaggcgtttgtaggggaggagaaggctgttaagttgtatagaagtgcgttg
atcaatacttacaagtacgggaggaagggtgggttggctaagggacttggccttggttcc
atgcactgcgttctcttgctctcctgggctttgctagtgtggttcactagtattgtcgtc
cataagaacataacaaatggaggagaatccttcaccaccatgctcaatgtcgttattgcc
ggactatctttaggcctggcagcacccaatatttctacatttttgagagctaggactgct
gcatactccatttttgagatgattgagagaaacacagtcaacaaagtgagtgccaagaca
gggcgcaagcttcacagcgtgaacgggcacatcaagtttgcgaatgttcagttcagttat
ccatcacgtcctgatgttctcatctttagtggatttaatctagacataccatccgggaag
attgttgcactagtcggtgggagtggttcaggaaagagcacagtcatttcattgatcgag
cggttctatgagcccctctctggggagatcttgttggatgggcataacatcaaggactta
gatctcaggtggctcaggcagcaaattggattggttaatcaggagcctgcccttttcgca
acaagcatccgagagaacatactgtatggaaaggatgatgcttccctcgacgagataaca
catgctgcaaagctctcagaggccattaatttcatcaaccaactacctgaacgatatgat
acacaggtcggtgagcgagggatccagttgtcaggtgggcagaagcagagaattgcaata
tcgagagctattctgaagaacccatctatccttctcctcgacgaggccacaagtgcgctc
gatgcagaatctgagaagagtgtgcaggaggctcttgacagggtcatgatcggccgaact
accatagttgtggctcataggctttccacgataaggaatgcagacatcattgccgtcgtg
cagggtggaaagatcgtggagactgggactcatgagcagctcatagttgaacccagcagt
gtctatgcatcactcatcaagctccaagagtcagcttctcagcatcgaccattgttatcc
gacggcgcgactatgggacgtcctctaagtataaaatattctagagagctatctggggga
cacacaagctttggaactagcttcagatctgataaagaatctgttacccgttacggtccg
gaaggaaatgatctaacaaaaacaaaggctgtgtctatgaaaaaaatgtattccatggtt
agtcctgattggatgtttggattgtttggcactatcggcgcttttgttgctggtgcccaa
atgccattgtttgcacttggagtcactcaagctctggtttcctactacatgggctgggag
gtcacacagagagaaattaagaagattgcactgttgttttgtggtggatctgttgtcact
gtcatttttcatgttattgagcacctcaactttggcatcatgggtgaaaggctaactctt
cgagtgagagagcgaatgtttggagcaatactaagaaatgagattggttggtttgatgat
gtgagcaataccagtgctatgttgtcatctcggctcgagacagatgctactctgctgcga
accatagttgtggatcgttcaacaatactcttgcagaatgtgggaatgttagtgacctca
ctgatcatagccttcatattgaattggcgtgtgactctagttgttttagccacttatcct
ttaatggtcagtgggcacatcagtgagaagttattcatgaggggatatggaggaaattta
aacaagagttacctcaaagcaaacatgcttgccgctgaggctgtgagcaatattcgcacg
gtggctgccttctgctcggaacaaaaagttattgacctctatttgaatgagttaaaggag
ccatccaaaagatctttccgacgtgggcaagctgccggcatcttcttcggtgtttcacag
ttcttcctgttcgcctcgtatgggcttgctctgtggtacgggtcagtcctgatgggcaaa
gggcttgccagcttcaagtcggtgatgaaatcattcatggtgctcatagtgactgcatta
gccatgggagagactttggctctggccccagacatcatcagggggaatcaaatggtagct
tctgtttttgagttgctggacagaaagaccgaggtgccatcagacgtcggagaagatgtg
ggaaaggtcgaaggagccatcgaaatgaagggagtccaattctgttatccttcaagacca
gatgtcgtaatcttccgggggttcgatctgagagttaaggctggcaaaagcatggcactg
gtcgggatgagtggatcaggcaagagcacggtgctggctctgatactgcgattctacgaa
gcaaccgcaggaaaaattttgattgacggcaaagatatcaagaaactcaagctgaaagag
ctcaggaagcacatcggcctagttcaacaagaaccagtactcttcgcgacgacgatccgc
gagaacatcctctacggtaaggacggcgcctctgaagcagagattgttgaggccgcgaaa
ctcgcgaatgcccacgccttcatcagtgccctcccagatggctactcgaccaaggtcggt
gagcgaggaatccaactgtccggtggccagaggcagcgcattgcgatcgcccgggccatc
ataaagaatcctgccatcttgttgctcgacgaggctacgagcgcgctcgatgttgagtca
gagcgcgtggtccagcacgcgctggacagagtaatgaagagccgcaccacgatcatggtg
gcgcaccggctttccaccatccgcaacgccgatgtgatctcggtgctggaagatggcaag
atcattgagcaagggagccattcctctctggtcgagaagaaggatggggcatactttaag
ctgattagcttgcagcagcagaagcagtag
DBGET
integrated database retrieval system
