Zingiber officinale (ginger): 122020176
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Entry
122020176 CDS
T08725
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122020176
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122020176
Ion channels [BR:
zof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122020176
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
SLATT_3
IQ
Motif
Other DBs
NCBI-GeneID:
122020176
NCBI-ProteinID:
XP_042433903
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Position
9A:104257438..104266565
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AA seq
694 aa
AA seq
DB search
MDHLEDKYMRFRDWSSELSVDSDKAFLGRKNRSSFSYINLNFQRAFDWIRKFFQFLTESS
KREPKSKRKVLDPQGPFLQRWNKIFVISCIVAVSVDPLFFYIPVIDGDNNCLYLQNNLEI
AACILRFFTDIFYAVHIIFQFRTGFVARSSRVFGRGVLIEDFSAIAKRYLSSYFIIDILA
VLPLPQMVILIIVPKLEGSALLNAKNVLVYIVIFQYFPRLIRIIPLYLEVTRSSGIIAKT
AWAGAAFNLLLYMLASHILGALWYLLSIERENTCWRKACALESDCVTDFLVCGQANSQKN
SFLETLCPITPDNATEFDFGIYLPALQNVVQSKKFLEKFLYCFWWGLQNLSSLGQNLQTS
TFIWEIMFAVFVSISGLVLFALLIGNMQTYLQSAAVRIEEMRIKRRDAEQWMSHRLLPES
LKERISRYEQYKWQETRGVDEKHLLQNLPKDLRRDVKRHLCLSLLKRVPMFEKMDDQLMD
AMSDRLQPILYTESSCICREGDPVNEMLFIMRGKLESTTTDGGRTGFFNSDYLTAGDFCG
EELLTWALDPTSITSLPISTRTVRTLSEVEAFALMADDLKFVASQFRRLHSKQLQHTFRF
HSQQWRTWAACFIQAAWRRYTKKKLEDALHEKEESNLHDAMVASDVAASPSLGAALYASR
FATNVLRNLRRHKSNKACTLMLLQKPAEPDFSAE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttggaggataaatacatgaggtttcgggactggagttcagagctatctgtg
gactcagataaggcttttttaggaagaaagaatagaagtagttttagctacataaacctg
aattttcaaagagcttttgattggataagaaagttctttcagtttttaacagaatcatct
aaacgagaaccaaagtctaaaaggaaagttctagatcctcaaggaccatttcttcagagg
tggaataaaatatttgttatatcctgtatagttgctgtttctgtggaccccttgtttttc
tacattccagtcattgatggtgacaataattgcctttatttgcaaaacaatctggaaatt
gctgcttgcatactgcgttttttcacagatatcttctatgcagtccatataattttccaa
tttcgaactggtttcgttgctcgttcatctagggtatttggaaggggagttttgattgag
gatttttcagcaatagccaaaagatatttatcgtcatatttcataattgacattcttgct
gttctcccacttccgcagatggttattctgataatagtgcccaaacttgaaggatcggca
cttttgaatgcaaagaatgtactagtttatatagtcatatttcagtatttcccaagactt
attcggatcataccattgtatcttgaagttacaaggtcctctggcataatcgccaaaaca
gcatgggctggagctgcatttaaccttttactttatatgcttgcaagtcatatattggga
gcgttatggtatttactttctatagaacgtgaaaacacctgttggagaaaagcttgtgca
ctagagtctgattgcgtaactgactttttagtatgtggacaagcaaacagccagaaaaat
agtttcttagaaactctttgccctataactccagacaatgcaactgaatttgactttgga
atttatctaccagctcttcaaaatgttgttcaatcaaaaaagttcctggagaagtttctt
tattgcttttggtgggggctccaaaatctaagttctcttggacaaaaccttcaaacaagc
actttcatatgggagattatgtttgcagtttttgtttccatctctggtttagttcttttt
gcacttctaattggcaatatgcagacatatctacaatcagctgcagtgaggatagaagaa
atgagaatcaaaaggagagatgcagaacaatggatgtctcataggttgcttcctgaaagc
ctgaaggagcgaataagccgctatgagcagtataaatggcaagaaacaagaggagtagat
gagaagcatctccttcaaaaccttcctaaagaccttcgaagggatgtaaagcgccacctc
tgcttatcacttctcaagcgggttcctatgtttgagaaaatggacgatcaactcatggac
gccatgtccgaccgtctgcaacccattctctacaccgagtccagctgcatttgccgcgaa
ggagacccagtgaatgaaatgcttttcatcatgcgagggaagctagagagcaccaccacc
gacggcggaaggaccggctttttcaattcagattatctcacggcaggagacttctgtggc
gaggagctcctgacctgggccctggacccgacctccataaccagcctcccaatctccacg
agaacagtcagaaccctgtccgaagtggaagccttcgctctcatggccgacgatctcaag
tttgtcgcatcccagttcagaaggctgcacagcaagcagctgcagcacacgttccgattc
cattcgcagcaatggaggacatgggcagcctgctttatacaggcagcatggcggaggtac
acgaaaaagaagctcgaagatgctttacatgagaaagaggaaagtaatctccatgatgca
atggtggccagtgatgttgctgcttctccaagccttggtgcggcgttgtatgcttcgagg
tttgcaaccaatgttctgcgtaacttgaggcggcacaagagcaacaaggcatgcacattg
atgttattgcagaagccagcagagcccgatttttctgctgaatag
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