Zingiber officinale (ginger): 122020221
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Entry
122020221 CDS
T08725
Name
(RefSeq) U-box domain-containing protein 9-like
KO
K27971
U-box domain-containing protein 9 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122020221
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122020221
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
U-box type E3
122020221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
Arm
ARM_ARMC5
ARMC9_ARM
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122020221
NCBI-ProteinID:
XP_042433983
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All DBs
Position
9A:25307085..25310359
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AA seq
472 aa
AA seq
DB search
MANSEAAEGLTGFVSAARAEELKKELRRKVREISESEDCGVGTYEDAARALAALRELRSG
GSVSPKEALASQRKAEEEFESAAVPKHFLCPISSELMRDPVILASGQTYDRLFIQEWFSS
GNRTCPQTQQVLSDITLTPNHLVRSMISQWCMEHGITLSPLDHEQEGGLITRKERNARRG
ILDKILLSSIPEQKQAVRELRLLTKRNGSFRALVGESPNAIPQLLSVLSVPGLNCDLEVQ
EDTVTTILNLSIHESNKKIVGDDPQAIVLLIDALKTGSMETRSNSAAALFSLSALESNKV
KIGEMGAMKPLVELLEQGSPNAKKDAGSAIFNLCMLHENRARALMEGVVRVLLRSIADQS
LVDESLAILALLSRDQEAVEGIAESGGVASMLSIVRDGVCLRNKQNNKENAAVVLFAICM
HDRTKLGDIAEEEKSTGSISRLVENGTPRARRKAAGMLDKWKRTMRSTHYSC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactctgaggcggcggaggggctgactggattcgtgtcggcggcgagggcggag
gagttgaagaaagagctgcggcggaaggtgagggagatttcagagtcggaggattgcggc
gtggggacttatgaggatgcggccagggcgctcgcggcactcagggaactaaggtccggc
gggagcgtgagtccgaaggaggccctagcgagccagaggaaggcggaggaagagttcgag
tcggcggccgtccccaagcatttcttgtgcccgatctcctcggagctgatgagagatccc
gtcatcctggcctccggacagacctatgacaggcttttcatccaggaatggttcagttct
gggaacagaacatgcccacaaactcagcaagtcctctcggacatcaccctcacccctaat
caccttgtccgcagcatgatctcccaatggtgtatggaacatggcatcactctctctcca
ctagatcatgagcaagaaggagggttgatcactaggaaggagcggaatgcgcggcgtggg
atcctcgataagatattgttgtcctctattcctgaacaaaaacaagcagttagggagctc
cgtctgctcaccaagcgaaatggatcgtttcgagcattggtaggggagagcccaaatgca
ataccacagttgttgtctgttctatctgtgccgggattgaattgcgacctggaggtgcag
gaggatactgtgaccacaatacttaacctttcaatccatgaaagcaataagaagatcgtc
ggtgacgacccccaagccattgttttgcttattgatgcattgaagactggaagtatggag
acccgtagtaattcagctgcggcactgtttagcttatccgcccttgagtccaacaaggtc
aagataggggaaatgggtgcgatgaaaccgctggttgaactgctagaacaaggcagtccc
aatgccaagaaggatgctgggtctgcaatcttcaacctctgcatgcttcacgagaaccgg
gccagggcactgatggaaggggtggttcgtgtgctcctgaggtccatagcggaccagtca
ctcgtcgacgagtcactggcaatcctcgcattgttatcaagagaccaagaggcagtcgag
gggatcgccgagtctggcggcgtggcctccatgctgagcatagtaagggacggcgtttgc
ctccggaacaaacagaacaacaaagagaacgcagcggtcgttctgttcgcaatttgcatg
catgaccggacgaagcttggggatatcgcagaggaggagaagtcgactgggagcatctct
cgtctggttgagaacggcacccccagggcacgcaggaaggctgctggaatgctggacaaa
tggaagaggaccatgcgtagcacgcattactcatgttga
DBGET
integrated database retrieval system
