Zingiber officinale (ginger): 122020264
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Entry
122020264 CDS
T08725
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122020264
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122020264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
HTH_29
TB
Motif
Other DBs
NCBI-GeneID:
122020264
NCBI-ProteinID:
XP_042434052
LinkDB
All DBs
Position
9A:103087815..103101332
Genome browser
AA seq
467 aa
AA seq
DB search
MTMGWCSNCEECPIYRDPDYRYVCCTLCGRILDQKIYYSRLTFAKDSSGQNRRETGNIIK
ILKYEFSASYLRTLKKGRDAITYIVNAMHINGDTIIDNAHAFYEMVLDEKFTKGRKISHV
AAACLYLSCRQLKLSYLLFDFSEDLQINIYVLGAMFFQLCKTLKLLEHPIVQKIVDPSLF
IHRFTKRLLGKNNDTVSEMALRLVAMIGRNWIQTVRKPNGFCGAALYISVHSHGLNYSKS
DIVSAVRICEATLNRWLIEFENTGICRLINKGSCDVNMTPYVGYVEGKVSKEPGSTDFAG
HESIDPLTFSEQHGFADSEDDESYHFSFSDIDDDEERKQRLVDEAKDMTHAQIPLDATCQ
ILKRKTFSSKINYEALETLFANEQDTAKKQKVESDVGDPHETLNKDDHVDDLDNKDGDEP
RASENDNYDGCYADDKGDRDEDFDCEDEDEDYDYGDEDYDYGYEDDF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgggttggtgtagtaattgcgaggaatgccccatctatagggatcctgactac
agatatgtgtgctgtaccttatgtggaaggattcttgatcaaaagatttactacagccgt
ctcacttttgcaaaggatagcagtggccagaatcgtcgagagactggtaatatcataaag
atcttgaaatatgaattctctgcatcatatttaagaactctaaagaaaggaagagatgcg
attacctatattgtaaatgccatgcacattaatggagacactataatcgacaatgctcat
gctttctatgagatggttcttgatgaaaaattcaccaaggggcgcaagatatctcatgtt
gcagcagcttgtctctatctttcttgcagacaattgaaactgagctatcttctctttgat
ttctctgaagacttgcagataaatatatatgtacttggagctatgttttttcaactttgt
aaaactttgaaactcttggagcacccaattgtccagaaaatagtagatccaagtcttttt
atccatcgattcacaaagcgacttttaggcaaaaacaatgatacagtttctgaaatggct
cttcgtttggttgcaatgattgggagaaattggattcagacagtgaggaaacctaacgga
ttttgcggtgcagcattatacatatctgtacattctcatggacttaattactccaaatca
gatattgtttctgctgtacgcatttgtgaagcaactttgaatagatggctaatagagttt
gaaaatacagggatttgtcgcttaattaataagggaagctgtgatgttaatatgactcca
tatgttggctatgttgaaggaaaagtatcaaaggaacctggaagtactgattttgcaggg
catgagtcgattgacccattaacttttagtgaacaacatggttttgcagactcagaagat
gatgagagttatcatttttctttttctgacattgatgatgatgaggaaaggaaacaaaga
cttgttgatgaagctaaagatatgactcatgcacagattcctcttgatgcaacatgtcag
atacttaagagaaagactttcagctcaaaaatcaattacgaagctctggaaactctgttc
gctaatgaacaagacactgcaaagaaacaaaaagttgaatcagatgttggtgatcctcat
gaaactctcaacaaggatgatcatgtagatgatctagataacaaggatggtgatgagcct
cgagcatctgagaatgataattatgatggttgttatgctgatgacaagggagatagagat
gaagacttcgattgtgaagacgaagacgaagactatgactatggagatgaagactatgac
tatggttacgaggatgatttttga
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