Zingiber officinale (ginger): 122020304
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Entry
122020304 CDS
T08725
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP40-like isoform X1
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122020304
Enzymes [BR:
zof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
122020304
Chaperones and folding catalysts [BR:
zof03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
122020304
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_2
TPR_1
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_14
TPR_16
TPR_7
TPR_12
MIT
TPR_6
Motif
Other DBs
NCBI-GeneID:
122020304
NCBI-ProteinID:
XP_042434108
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Position
9A:complement(11263386..11268261)
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AA seq
386 aa
AA seq
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MEQGEVNSRTTVAEAISNPRCYLDISIGGEVEGRIVVELFADVVPRTANNFRALCTGEKG
VGPAADVPLHFKGSCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFVMKHERKGM
LSMANSGPNTNGSQFFITTTRTTHLDGKHVVFGKVLKGMGVVRSIEHTPVGEADRPTIDV
VIADCGELPEGADDCVSNFFKDGDLYPDWPNDLDEKPNEVSWWMNVVESAKTFGNDNFKK
KDYKMALRKYRKSLRYLDVCWEKEEIDEAKSLLLRKTKSIILTNSSACKLKLRDLEGALL
DADFAIREKEANAKAYFRQGQAHSALNDVDAAVESFLRALELEPNDGAIKKELAAAKKKI
ADRRDKERRAYSRMFQPSAKSNGNDD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggcgaggtgaactcccggaccacggtggcggaggcgatttcgaacccgcgc
tgctacttggacatcagtatcggcggcgaggtggaggggaggatcgtggtggagctcttc
gctgacgtggtgccgcggacggcgaataactttagggcgctgtgcaccggggagaagggc
gttgggcccgccgcagacgttccgctccacttcaagggttcatgttttcatcgtgtcatc
aaaggtttcatgatacaagggggagatatatctgctggtgatggaactgggggagaatcc
atctatggtttaaaatttgaggatgagaattttgtcatgaaacatgaaagaaaaggaatg
ctttcaatggcaaattctggtcctaacacaaatggatcccagttctttatcactactact
agaacaactcatctagatggaaaacatgttgtgtttgggaaagttcttaaaggcatggga
gttgttcgttcaattgagcacactcctgttggtgaggctgatcgccccactattgatgta
gtgattgctgattgcggagaacttcctgaaggggctgatgattgtgtgtcaaacttcttt
aaggatggagacttgtatcctgactggccaaatgacttggatgaaaagccaaatgaggtt
tcttggtggatgaatgttgtggaatctgccaaaacatttggaaatgataacttcaagaaa
aaagactataagatggctcttagaaagtacagaaaatctttgcgctacttggatgtatgc
tgggaaaaagaggagattgatgaagcaaagagtttgttgttgcgcaagacaaagtcaatt
attctaacaaatagttccgcttgcaagttaaagctacgagacttggaaggtgctttgtta
gatgctgattttgcaatacgtgaaaaagaggcaaatgcgaaagcttattttcggcaaggt
caggctcacagtgcactaaacgacgtggatgctgcagtggagagcttccttagagcactt
gaattagagcctaatgatggagctattaagaaagagctggccgccgcaaagaagaagatt
gctgatcgacgagacaaggagcgacgggcttactcgagaatgttccaaccctctgccaag
tccaatggcaacgatgactag
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