Zingiber officinale (ginger): 122020346
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Entry
122020346 CDS
T08725
Name
(RefSeq) BTB/POZ and MATH domain-containing protein 3-like isoform X1
KO
K10523
speckle-type POZ protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122020346
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122020346
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
MATH
TRAF-mep_MATH
BACK
Motif
Other DBs
NCBI-GeneID:
122020346
NCBI-ProteinID:
XP_042434171
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Position
9A:complement(54335607..54342716)
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AA seq
410 aa
AA seq
DB search
MEKETEKGKAGHGEQNGLNVSRSKSICETVNGSHEYTIKGFSLAKGMGSGKYMSSDTFAV
GGFQWAIYFYPDGKNPEDNSLYVSVFIALASEGTDVRALFELTMIDQSGKGNHKVHSHFE
RALEGGPYTLKYRGSMWGYKRFYRRTALETSDYLKDDCLVMHCTVGVVRNRIETPTQFSI
NVPSSDLGQCLKELLKSGIGSDIVFQVGDETFQAHKQILAARSPVFNAQFFGLIGNPDVD
RVIVDDVEPPVFKAMLIFIYSDELPDVHELIGSVSMSTSTIIIQHLLAAADRYGLERLSL
LCEAKLCEGITADTVATTLALAEQHQCVQLKNVCLKFIAIRENLGAVMQTEGFDYLEATC
PTVLAELLETVAVVDDDSGSACRKRSVSSNLGLNSLDSVDVSGRRLRRRM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagacggagaaggggaaggccggacatggagagcagaatgggctcaacgta
tcccgctcgaaatcgatctgcgagaccgtgaacggctcgcacgagtacaccatcaagggt
ttctcgctggccaaggggatggggtcggggaagtacatgtcaagcgacaccttcgccgtg
gggggtttccagtgggctatatacttttaccctgacggtaagaaccccgaggacaactcc
ctctatgtgtccgtcttcatcgcccttgccagcgagggtaccgacgtgcgggcgctcttt
gagctcaccatgatcgatcagagcggaaaggggaaccacaaggtacacagtcattttgag
cgggcgctggagggcgggccgtacacgctcaagtatagggggagcatgtggggttacaag
agattttacagaagaacagccttagaaacatcagactatctcaaggatgattgtttggtc
atgcattgcacagtgggcgtcgttagaaaccgcatcgaaacaccaacccagttttccatc
aatgttccatcatcagacttgggtcaatgcctaaaggagttattaaaatctggcattggc
tctgacatagttttccaggttggggatgagacatttcaagcacacaagcaaattctcgcc
gctcgctctcctgtatttaatgctcaattctttggtcttattgggaatcctgacgtggat
agagtaattgtagatgatgtggaacctcctgtattcaaggccatgcttatttttatatat
tctgacgaactccctgatgttcatgaattaattggttcagtttctatgtccacatccaca
ataataatacaacatttattggccgccgccgatagatatggtctggagcggttgagtttg
ttgtgtgaagctaaattgtgtgaggggatcactgctgatacagtagcaacgactttggcc
cttgcagagcaacatcaatgtgttcaactgaaaaatgtgtgtctcaaatttatcgcaatt
cgagagaatttgggagctgtgatgcagactgaaggatttgactacttggaggccacatgc
ccaaccgtgcttgcggagctcttggaaactgttgctgtcgtggatgatgactccggttca
gcgtgccgtaagaggagtgttagcagcaacctgggcctcaattccctagacagcgtcgat
gtgagtggaagacgattgcgcagacggatgtag
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