KEGG   Zingiber officinale (ginger): 122020354
Entry
122020354         CDS       T08725                                 
Name
(RefSeq) protein NEDD1-like
  KO
K16547  protein NEDD1
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zof03036]
    122020354
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zof04812]
    122020354
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     122020354
   Microtubules and associated factors
    gamma-tubulin ring complex
     122020354
Cytoskeleton proteins [BR:zof04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     122020354
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD_LRWD1 Beta-prop_SCAP KNTC1_N Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_NOL10_N PROPPIN Beta-prop_DCAF4 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 122020354
NCBI-ProteinID: XP_042434188
LinkDB
Position
9A:54105903..54114693
AA seq 776 aa
MRFVDSSVSLLATCGGDTVKLFDVTVDAGDPCTLSYTPSPGSQINSVKWNHTNLVVASAG
DDKKISLWNKNGQSMGSFPSHGSDLADDIEESINCISFSNKSSRYLCSGGSGHIVKIWDL
QRKRCIKRLSGHTDTITGVMYNCKDEHLASINEKGDLILHYLASGTRAELKDPNGQVLRV
LDYSRFSRHLLSTAGDDGSVHIWDTTGRRPKVSWLKQHSAPTTGICFSPSSDKIIVTVGL
DKKLYMFDSGTKRPSYCMPFEAPFSSLAYCDDGNLLAAGTNNGRVVFYDVRGKPQPFTVL
RAYSSSEAIINLCWQRTKPVVVNEKNCTAETALLGGSSEDSVLMPDPLPSVAVSKFSSTS
VLPSLRASNISGSSISITSNISTADETPHRSRLWPGGTLPKLHARSSYDSKDDMDVFSPL
VDVQPITSSLGSWWNDNDEMKKDQTFVDKKSTLFSSSRRYPLPDGTTDSHPISDWRSIAT
SRQDDNSPIQPLAAKNFTQTKSEIFIPQPPGNTLADKSTSIRQPISSSRFLPPVSFDSGA
ISAGPYDSSSSLNASKNSLISPALTSLDLQNKIFNDSGSASLEPSSVYGHPSTIISSGAK
TIGSLANPDFSGTVFSGLPRRHLTSSERTSTSSVFSDSVVSAISSPKSKKTGQETKEELV
NSLLSRQDASASVGLASGSLQASNVAMHQPSWSSGHSDQQIGASFSLQLAQRTLEETLES
AQNPMLEAVRNVHIEILRQFHMQEMQMFELHKTVLEKLEELMKEVQSLRRESQQLR
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgcggttcgtggattcatctgtttcgcttctcgccacttgcggtggcgacaccgtcaag
ctcttcgacgtcacggtggatgccggcgatccctgcaccctcagctacacgccttccccc
ggatctcaaatcaactccgtcaagtggaaccacaccaacctagtggttgctagtgctggt
gacgataaaaagatatcactttggaataaaaatggccaaagtatgggatcctttccttct
cacggcagtgaccttgctgatgacattgaggaatctataaattgtatcagctttagtaat
aaaagttctagatatctttgctctggaggaagtgggcatattgtcaaaatatgggacctg
cagaggaaaaggtgcatcaaacggttgagtggtcatactgacacaattacaggtgtaatg
tacaactgcaaagatgaacatttagcatccatcaacgagaagggggatctcatacttcat
tatcttgcttccggaacacgggctgaactcaaggatccaaatgggcaggtactaagagta
cttgattattctcgatttagtcgacatcttttgtcaacagctggggatgatggatctgtt
catatttgggatacaactggtcgcagaccaaaggtttcttggttgaaacagcattctgcc
ccaacaactggtatttgcttctctccatcaagtgacaagattattgttacagttggtctt
gataaaaagttgtatatgtttgattctggaacaaaaagaccctcatattgcatgcctttt
gaggcacccttctcatcgctggcatactgtgatgatggtaatctattggctgctgggaca
aataatggacgtgtagtattctatgatgttcgagggaaacctcaacctttcacagttctt
cgtgcatacagtagttcagaggcaatcataaacctgtgttggcaacggacaaagccagtt
gttgtaaatgaaaaaaattgtactgctgaaactgctcttctggggggcagtagtgaagat
tctgtgcttatgccagatcccttgccttctgttgcagtgtctaagttttcatccacatca
gtactgcctagcctacgtgcttcaaatatcagtggatcatcaatttcaattacatcaaac
atatccacagccgatgaaactcctcatagaagtcgcttatggccaggtggaacactgcca
aagctacatgcacggtctagttatgattcaaaagatgacatggatgttttttctccactg
gttgatgtccagccaattacatcatcacttggtagttggtggaatgataatgatgaaatg
aaaaaagaccaaacatttgttgataaaaagtcgactttattttcatcctcaaggagatat
ccattacccgatgggaccactgattcacatccaatttcagattggagatctattgcaacc
tcaagacaggatgacaactcgcctattcaaccactggctgcaaaaaatttcacacaaaca
aagagtgagatattcattcctcaacctcctgggaacacattggcagacaaatcaaccagc
atccgccaaccaatttcatcatctcgtttcttgcctcctgtatcatttgactctggggcc
atctctgcaggcccatatgattcatcttcatctcttaatgcctccaagaactctttgatt
agtcctgcattaacttccttggatcttcaaaacaaaatcttcaatgattctggttcagca
tcattggaaccttcatctgtttacggtcatccttctaccatcatctcctcaggggctaaa
acaataggatcgttagctaaccctgatttctcaggaactgtattctcaggtcttccacga
agacacttgactagttctgagagaacaagcaccagttccgtctttagtgacagtgtggta
tcagctatcagttcacccaaatcaaaaaaaactgggcaagaaaccaaggaagaattggtg
aatagcctattgtcaagacaagatgcatctgcatcagtcggtttagcatcagggagtttg
caggcatctaatgtagcgatgcatcaaccttcatggtcatcaggtcactcagatcaacaa
attggggcttcattttctcttcaactagcccaacgcactcttgaagagactttggaatca
gcacaaaatcccatgcttgaagctgtgagaaatgttcacatagagatccttagacaattc
cacatgcaggagatgcaaatgttcgagctacataaaacagttttagaaaagctggaggaa
ctgatgaaagaagtgcagtcgttgcgcagggaaagccaacagctccgctaa

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