KEGG   Zingiber officinale (ginger): 122020422
Entry
122020422         CDS       T08725                                 
Name
(RefSeq) DNA polymerase epsilon subunit B-like
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03030  DNA replication
zof03410  Base excision repair
zof03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122020422
   03410 Base excision repair
    122020422
   03420 Nucleotide excision repair
    122020422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:zof03032]
    122020422
   03400 DNA repair and recombination proteins [BR:zof03400]
    122020422
Enzymes [BR:zof01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     122020422
DNA replication proteins [BR:zof03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    122020422
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      122020422
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N
Other DBs
NCBI-GeneID: 122020422
NCBI-ProteinID: XP_042434279
LinkDB
Position
9A:complement(26945605..26950083)
AA seq 531 aa
MVVSGRTRKKVQHKFKLRGFTFKVDAMEEVLAYLAHFPNDEDEALDLLIDEMYNKSLHSS
ILDREVIHDVVASLLEAHAAPDNSARSTSDHAVLRVIDVFHIHRFHYDGIKKVFYEHTGK
LPIHGDAVDKAALYRDRYQLLFQRISRDKYFSRPVFATEMTESESCEITSIQSLIGCTGR
RWIMGVISQLEEGQFYLEDLAAAVPIDLSNSKITAGFLVENTVIVAEGELLPNGIFQVNT
CGFPPLEDREVSLKLLMGLDFFGGGVLSNDERSKLLEMEKAAVNHMLVILSDVWLDNEET
MEKLAVVFDAYEGVEVVPYLFILMGNFCSRPCHFAFHSYSNLRMQFGKLGEMIASHPRLK
EQSKFLLIPGPDDAGSSKVLPRCALPKYLTEEFQKHIPNAIFSSNPCRVKFYTQEIVFFR
QDLLYRMRRASLIPPPTEETNDHFEHLVVTITHQSHLCPLPLTVQPIIWNYDHCLRLYPT
PHMIVLADKSEQKSFKYTGITCVNPGSFSSDNSFAVYRPCTQEVELSALDG
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggtggtctctggtagaactcggaagaaggttcaacacaaattcaagctccgtggcttc
accttcaaggttgatgccatggaggaggtccttgcttaccttgctcattttccgaatgac
gaagatgaggctcttgacctccttattgatgagatgtacaacaaatctttgcattcgtca
attttggatcgtgaggtgatacatgatgtggttgcctctctgttagaggcgcatgctgcc
cctgataatagtgccagaagcactagtgaccatgctgtcctccgggttattgatgtattc
cacatccatcgatttcattatgatggcatcaagaaggtcttctatgaacacactggtaag
ctgcctatccatggtgatgctgtcgataaagctgccctgtacagggatagataccagctt
ttgtttcagaggatctctcgtgataagtacttctcaagacctgtttttgctactgaaatg
actgaatctgagagctgtgagattacttccatccagtcactgattggatgcactggaaga
agatggatcatgggggtgatctcccaattggaagaaggccaattctacttggaagatctg
gctgctgctgtgccgattgatttatcaaattcaaaaatcacagcaggattccttgttgaa
aacactgtcattgttgcagagggagaattacttcctaatggaatttttcaggttaataca
tgtggatttccaccattagaggatagagaagtgtcattaaaattactcatgggtcttgat
ttctttggtggaggagtgctatcaaatgacgaaaggtccaagctattagagatggagaag
gcggcagtgaatcacatgcttgtgatcctatcagatgtttggttggacaatgaagagact
atggagaaactcgccgtggtctttgatgcttatgagggtgttgaggtggttccttatctg
tttatcttgatggggaatttctgctcacggccatgccactttgcttttcattcttattca
aacctcagaatgcagtttgggaagcttggggaaatgattgcatctcacccaaggcttaaa
gaacaaagcaaatttttacttatcccaggtcctgatgatgcaggttcatccaaagtactt
cccaggtgtgctttgcctaagtatctcactgaagaatttcaaaaacacattccaaatgct
attttttcaagcaacccctgcagagtcaaattttacacccaagaaattgtatttttccgg
caagatctgctttacagaatgcgtagggcttctttaattccaccaccaacagaggaaaca
aatgatcacttcgagcatctggtagtgactatcactcatcaaagtcacctttgccccttg
cctttgactgtgcaacctatcatttggaactatgatcactgtctgaggctatatccaact
ccccatatgatagtcttggcggacaaaagtgagcagaaatccttcaaatatactggaatt
acttgtgtcaatccgggttctttctctagcgacaattcctttgcggtatatcgcccgtgc
actcaggaggtcgagttgtctgccttggatggttag

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