Zingiber officinale (ginger): 122020461
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Entry
122020461 CDS
T08725
Name
(RefSeq) transcription factor-like protein DPB isoform X1
KO
K04683
transcription factor Dp-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122020461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122020461
03036 Chromosome and associated proteins [BR:
zof03036
]
122020461
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122020461
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122020461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DcpS_C
Motif
Other DBs
NCBI-GeneID:
122020461
NCBI-ProteinID:
XP_042434333
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All DBs
Position
9A:271610..276245
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AA seq
352 aa
AA seq
DB search
MDEGSNSTTSFPKSHVRGGGGGLFPLGTPAFSSCQSASTSGSAGSPSSRSEIVATTPASE
NTLVRLNHLDIHGDGEGTPEGAVSGKKKKRSSRAVSGDKSGRGLRQFSMKVCEKVESKGR
TTYNEVADELVTEFTNPQNNPGSQDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIHW
KGLPRTSLNDIEELKAERIGLRSRIDKKTAYLQELHDQYEGLQNLVQRNDKLYGSGNLPS
GGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDSYVVKAMGLCMREKNDG
SLAPCSDGGDGSSVIGASQKHSSPSSRANSMTRVLASPPKPGILKSRVKNEH
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggggagcaatagcaccactagcttccccaagtcccacgttcgcggcggtggc
ggcggcctcttccccctcggtacgccagccttctctagctgccagtcggcttccactagt
ggcagcgccggctcgccctccagcaggagtgaaatagtggcaacgactcccgccagcgag
aataccttggtcaggctgaaccacctcgatatccacggggacggcgaggggacgcccgaa
ggagccgtgagtggcaaaaagaaaaaacggagttctagggctgtttcaggtgataaaagt
ggcaggggtcttcggcaattcagcatgaaagtttgtgagaaagttgaaagcaaggggcga
actacttataacgaggttgcagatgaacttgtcactgaatttacaaatccacaaaataat
ccaggatctcaagatcagcagcaatatgatgagaagaacatacggcgaagggtatatgat
gcactaaatgttctcatggctatggatattatctctaaagataaaaaggagatacattgg
aaaggtttacctcgaactagtctaaatgatattgaagaattaaaggcagagagaattgga
ttgaggagtagaattgataagaaaactgcatatttgcaagagttgcatgatcaatatgaa
ggtctccaaaacttggttcaaagaaatgacaagttatatggatcaggaaatcttccatct
ggtggcgttgctttaccatttatcttggttcagactcgtccacatgctacggttgaggta
gaaatttcagaagatatgcaacttgtacattttgacttcaacagtaccccgtttgagcta
catgatgattcttacgtggttaaagcaatgggattgtgcatgcgagaaaaaaatgatggt
tctctagcaccttgctctgatggaggtgatggctcgagcgtgataggtgctagtcagaag
cactcctcaccatcttctagagctaattctatgaccagagttttagcttctcctcctaaa
cctgggattctaaaatcgcgtgtgaagaatgaacattaa
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