KEGG   Zingiber officinale (ginger): 122020629
Entry
122020629         CDS       T08725                                 
Name
(RefSeq) serine hydroxymethyltransferase 3, chloroplastic-like
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof00260  Glycine, serine and threonine metabolism
zof00460  Cyanoamino acid metabolism
zof00630  Glyoxylate and dicarboxylate metabolism
zof00670  One carbon pool by folate
zof01100  Metabolic pathways
zof01110  Biosynthesis of secondary metabolites
zof01200  Carbon metabolism
zof01230  Biosynthesis of amino acids
zof01240  Biosynthesis of cofactors
zof04981  Folate transport and metabolism
Module
zof_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:zof00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    122020629
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    122020629
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    122020629
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    122020629
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    122020629
Enzymes [BR:zof01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     122020629
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 122020629
NCBI-ProteinID: XP_042434570
LinkDB
Position
1A:complement(22005954..22010968)
AA seq 528 aa
MSAYGVAVSGTFHQTLKTKCYGSDPKIHRADMLPNHITLNNRRPYNALSARGSLVAGRPS
PSVSVTDSNSGGKTNNLKDYPLKEADPELHALIQKEKQRQFNCLELIASENFTSRAVMEA
SGSCLTNKYSEGLPGKRYYGGNEYIDQVEMLCQQRALQAFHLDENKWGVNVQPLSGSPAN
FEVYTALLSPHDRIMGLDLPHGGHLSHGFMTPKKRVSGTSIFFESMPYRLDESTGYIDYD
MLEKTAALFRPKIIIAGASAYSRDFDYPRMRKTADAVGAFLMMDMAHISGLVAAQVVADP
FEYCDIVTTTTHKSLRGPRGGMIFYKKEPVLNVDLESSINNAVFPGLQGGPHNHTIAALA
ACLKHAQSPEFKAYQVQVVANCKALASRLTELGYKLVSGGTDNHLVLLDLRPQGIDGARV
EKILDISSITLNKNSVPGDKSAQVPGGIRIGTPAMTTRGLKEKDFETVADYIHEGVQIAL
RAKSCTKGTKLKDFLESVESPEFSLKEPVAELRRKVEALTNQFPMPGL
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgtccgcttatggagtagctgtatctggtacatttcaccagacccttaagacgaagtgt
tatggatcagatcccaagattcatagggcagatatgctgccaaatcatattacactcaac
aataggagaccttacaatgctcttagtgcccgaggaagcttagtggctggaagaccatct
ccatctgtgtcagtaactgattccaattctggaggaaaaacaaataatttgaaggattac
ccactgaaggaagcagatcctgaactgcatgctcttattcagaaggagaagcagcgtcaa
tttaactgtttagagcttatagcttctgaaaattttacttctcgggcagtgatggaagca
tctggttcttgtctaacaaataagtactcagaaggattgcctggtaaaagatactatgga
ggaaatgagtatattgatcaggttgagatgctctgtcaacagagagcattgcaagcattc
cacctagatgaaaataagtggggcgtaaatgtgcaaccactctctggatctcctgctaat
tttgaagtttacactgctcttcttagtcctcatgaccgaataatggggcttgacctacct
catggaggccatctgtctcatggtttcatgacacctaaaaaaagagtttcaggcacttct
atattttttgaatctatgccttaccgccttgatgagtcaacaggctacatagattatgat
atgcttgaaaaaacagctgctctcttccgacctaagatcattattgctggagcaagtgca
tattctagagattttgattatcctcgtatgaggaagacagcagatgctgttggtgcattt
ctaatgatggacatggcccatataagtgggcttgttgctgctcaagtagttgctgatccc
ttcgagtattgtgatattgttacaacgaccacacacaagtctttacgagggcctcgtggc
ggcatgatcttttacaagaaggagcctgttttgaatgttgatttagaatcctctatcaat
aatgctgtcttcccaggcttgcagggtggccctcataatcatacaattgctgctcttgct
gcatgtttaaaacatgcccaatcacctgaattcaaggcttatcaagttcaggttgtagct
aattgcaaagctcttgcatcaaggctgactgaattgggttacaagcttgtttctggggga
actgataatcaccttgttctgttggatttgagaccacagggcattgatggtgcccgggtc
gagaagatcttggacatcagttccatcactctcaataagaactctgttccaggtgacaaa
agtgcacaagtccctggcggtatcaggattggaacaccggcaatgaccaccagaggacta
aaggagaaggattttgaaactgttgccgactacattcacgagggtgttcagattgctctg
agagccaaatcctgcacaaaaggaacgaagctcaaagatttcctggagagtgtcgaatct
ccagaattctctttaaaagagccagttgcagaactcaggagaaaggtagaagctcttacg
aaccagttcccaatgcccggattgtga

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