Zingiber officinale (ginger): 122020655
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Entry
122020655 CDS
T08725
Name
(RefSeq) transmembrane E3 ubiquitin-protein ligase FLY1-like isoform X1
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122020655
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122020655
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122020655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
DUF2921
Prok-RING_4
zf_RING_Vps8_fungal
zf-RING_16
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
122020655
NCBI-ProteinID:
XP_042434597
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All DBs
Position
9A:complement(34074781..34101986)
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AA seq
559 aa
AA seq
DB search
MEGRRGERWSLWSAAAVAVFLGLVSPLMALRPLKQRAFAVDGAWGEELFLRRDDSDSSFS
PWNITGTYKGQWSFLDVANGSSRFLDFGKSSGVSVLELVTTQTKIRGVHYVQGSITFHDV
LDKEHDHGFAQMRLDGVHIWPFHKLRMVANSVPNNEPLQQDYFSNPYHLIGVFSSQVLQE
SIQDKRPRKKSLTNDIEKHCHIEIAAQVSQISSRQNVDGNHELYHLEGLMEGPAMDGDGE
CFPSILLNATSLNTEAYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILMI
GQQAIMDAYLCLLNLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLQNG
ESWEIMRRELSVLYSRFYGILLGGILLLYHLHNFLRPVIFIMYSFWIPQIVTNVIRDTRK
PLHPYYIIGMSVTRLAIPFYIFGCPSNFLRIEVDNYWCICLGVFLGLQSLILLLQHYLGS
RWFIPRQMLPEKYCYYRKFESYASQATDCVICMTTIDFTENSNRYMVTPCDHCFHSVCLQ
RWMDIKMECPTCRRALPPA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaagggaggagaggggaaaggtggtctttgtggagtgctgcggcggtcgcggtgttt
cttgggctggtcagccccttgatggctctgaggcctctgaaacaaagggcttttgcggtt
gatggagcttggggcgaggagcttttccttaggagagatgacagcgacagttctttttct
ccgtggaatattacaggaacatataaaggacaatggagctttctagatgtagcaaatggt
tcttccagattcctagattttgggaaatctagtggtgtatcagttctagagttggtgact
actcaaacaaagattcgtggagtacactatgttcagggatccattactttccatgatgtt
cttgacaaagaacacgatcatgggttcgctcagatgagattagatggagtgcacatatgg
cctttccacaaacttcggatggtggcaaacagtgttcctaataatgagccacttcaacag
gattacttctccaatccctatcatttgattggagttttctcctcccaagttcttcaggaa
tcgattcaagataaacgccctagaaaaaaatctctgactaacgacattgagaaacattgt
cacatagagattgctgctcaagtttcacagatctcgtctagacaaaatgtagatggaaat
catgagctttaccatttagaggggttgatggagggtccagcaatggatggtgatggcgag
tgctttccttcaatcttgttgaatgcaacttctttgaatactgaggcctattacaacaaa
gcagttaactatacgttgatggtcacttttatatcatttctccaagttcttttgttgatt
agacaaatggagcatagcaatactcaatctggtgctgctaaagtttctattttaatgatt
ggtcaacaagctattatggatgcatatctatgcctcttgaatttaactgctggaatttta
gtagagtccctgttcaatgcttttgccaccgcagctttcttcaagtttgttgttttttca
atttttgagatgagatatctccttgctatatggaaagcaagtagacctttgcaaaatggt
gaaagctgggaaatcatgaggcgggagttatctgttctgtatagccgtttctatgggatt
ttgttaggtggtattctgctactataccatctgcacaatttcttgcggccagtaattttc
attatgtactcattttggattccccagatagtgactaatgtcattcgggatacaagaaag
cccttgcacccatattacataatcggaatgtctgttactcgcctcgccataccattttac
atatttggctgcccaagcaactttttgcgaatagaggttgataactattggtgcatatgt
ttgggagtatttttgggattgcaatcattgattctcctacttcagcattatcttggatcc
cgatggttcattccccgtcagatgctccctgaaaagtattgctattacaggaagtttgaa
agttatgcatctcaagcgacagattgtgtcatttgcatgactaccattgacttcacagag
aactcaaatcgctatatggtgacaccatgtgaccattgcttccactcggtgtgcttacag
agatggatggatataaagatggaatgcccgacatgcaggcgtgctcttccccctgcatag
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