Zingiber officinale (ginger): 122020734
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Entry
122020734 CDS
T08725
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122020734
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122020734
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
UBA_8
FAF1
TAF4
CDC45
Motif
Other DBs
NCBI-GeneID:
122020734
NCBI-ProteinID:
XP_042434688
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Position
9A:94611135..94614995
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AA seq
453 aa
AA seq
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MADGFEDKLGYFQAITGIEDPDLCTDILSAHNWDLELAIASITSNAPSSSSAAAAANPFP
AAASSSAPTPAVVAGPAPGIAWRIVTLPFYVVSGAVGLGFWIAGGVLNRTIGILGYLASP
RGAEGDRLIPVSDSTAEAGDFVAAFERDYPADTRPRFAAEGFMDALLRAQREFKLMLVYL
HSPEHPDVPAFCEGTLCSPPVVAFLTENFVVWGGSIRREEGFKMSNSLKASRFPFCAIVM
ATDNQRIALLHQIEGPKPPEEMLTLLQRVFEECAPSLIAARIESEERRNNQRLREEQDAA
YRAALEADQARERQLKEEEDRLKREAEEAERKRKEEEEALARAAHEAAEKEAALTRRRQE
KAMALGAEPDKGPNVTRVLVRFPTGERKERRFDCTTTISSLYDYVDSLGCLEAENYTLVS
NFPRVTYGSEKHSLTLKEAGLHPQASLFVEIDS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggattcgaggacaaattgggctacttccaggccattaccggcatcgaagat
cccgatctctgcaccgatatcctctccgcccataattgggatcttgagctcgccatcgcc
tctatcacatccaatgccccatcctcctcatctgccgccgccgcagcaaatcctttcccc
gccgccgcttcctcctccgcccctacaccagccgtggtcgccggcccggctcccggcatc
gcctggcggatcgtcaccctccctttctacgtcgtctccggcgccgttggcctcggtttc
tggatcgcaggcggagtcctcaatcgcaccatcggcatcctcggctatcttgcctcgcca
cgcggcgcggagggcgaccgcctgatccccgtctcggactccacggccgaggcgggggac
ttcgtcgccgcctttgagagggattaccctgccgacaccaggcctcgcttcgctgccgag
gggttcatggacgccctactgcgcgcacagcgggaattcaagctgatgctcgtgtacctg
cactctcctgagcacccggatgtgccggccttctgcgagggaaccctgtgctcgccccca
gtggttgcttttctaactgaaaattttgtggtttggggcgggagcattaggagagaggaa
ggatttaagatgagtaatagcctcaaggcttcccgctttccattctgtgccatagtcatg
gccaccgacaaccaaaggattgccctccttcatcagattgagggccccaagccacctgaa
gaaatgcttacattgcttcaacgtgtatttgaagaatgtgccccatcattaattgctgca
aggatagaatctgaagagcggcgaaacaatcagcgtttacgagaagagcaagatgctgca
tatagagcagcacttgaagctgatcaagcaagagagcgtcaactgaaggaagaggaagat
aggttgaagagagaggctgaagaggctgaaaggaagcgtaaggaagaagaagaggccttg
gcaagagctgctcatgaagctgctgaaaaagaagctgctcttactagaagacggcaagag
aaagcaatggcattgggtgctgaacctgacaaagggcctaacgttacacgagtgcttgtt
cgattcccaactggagagcgcaaggagaggaggtttgactgtaccacaacaatcagctct
ctatacgactatgttgattccttgggatgcttggaagcagaaaactacaccctagtttct
aactttccccgtgtgacctatggctctgaaaagcattcgttgacgctaaaggaagccggc
ttgcacccacaagcgagccttttcgtcgagattgactcatga
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