Zingiber officinale (ginger): 122020791
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Entry
122020791 CDS
T08725
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122020791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122020791
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122020791
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122020791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122020791
NCBI-ProteinID:
XP_042434746
LinkDB
All DBs
Position
9A:complement(102958419..102979532)
Genome browser
AA seq
1153 aa
AA seq
DB search
MTLLKDELGLSTRSLSAPVNSAVDKFPLIPAFLKVRGLVKQHLDSFNYFIDHGIKKILEA
NNFLVCRHDPNFYLRYTNIEVGRPMVGVDHAMEKLTPHICRLSDRTYAAPIMVDVEYTIA
NQATKNPEVKRLTNLVIGRMPIMLRSSRCVLSGKDDVELSKLGECPLDPGGYFIVKGTEK
VILIQEQLSKNRIIIDTDTKGRVAASVTSSTHETKSKTVFFMDKGKIYLQLNQFNKPIPI
MVILKAMGMESDQEIVQMVGRDPRYGDLLFPSIQECAFERIYTQQQALDFLDGKIGRSNP
TNHGNKKTGLAKVILLDVFLAHVPLYEGNFRPRWIYAAVMLRRMLDAILNTDTFDDKDYL
GNKRLELSGQMISLLFEDLFKSMNTHILELANRAYEKASRSSRLDFTHFLRQNNDITLGL
DRSISTGNWDLKRFKMHRKGVSQVVSRLSYIAALGHMTRISPQFEKTRKVSGPRALHPSQ
WGMLCPCDTPEGEGCGLTKNLALLTHVTTDEEDGPLISLCYTLGVEDLALLSGEELHLPG
SFLVMFNGLILGKHRQPKLFAGNMRKLRRRGKIGEFVSIFVNEEQNCVYIASDGGRVCRP
LVIADRGISRIKDYHMKELQLGIRTFDDFLRDGLVEYLDVNEENNALIALYECENDTDDS
EKKKCDITHIEIEPLTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRADS
LLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFG
RCISMKKYTVVKEIYGNGATDRIVKPRKDKENQRMQILDGDGIAAPGEIIRNNDIYVNKE
SPINTRERTGGPTGLKDEEYRKTPAVYKGPEGETCVVDRVILCSDASNKLCIKSIIRHTR
RPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELLGG
KAGVSCGRFHYGSVFGEPGGHADKVEDISKTLVKHGFSYSGKDFLYSGITGFPLQAYIFM
GPIYYQKLKHMVIDKMHARATGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLI
FERLMLSSDPYQVQVCSQCGLLGYYNYKLKTAFCSMCKNGKNISTIRLPYACKLLFQELQ
AMNVVPRLKLVEA
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgacgttattgaaggatgaactcggtctgagcaccagatcgctctcagccccggtcaat
tccgccgtagataagtttcctcttatccctgcatttttgaaggtgagagggttggtgaaa
caacatttggattcttttaattatttcatagaccatggtatcaaaaagatactcgaggcc
aataattttctcgtctgtcgtcatgaccccaacttctatctgaggtacactaatattgaa
gttgggaggccaatggttggtgtggaccatgccatggagaagcttactccacatatatgc
cgactctcggatcgaacatatgctgcacccataatggttgatgttgaatacacaatagca
aatcaagcaactaagaatcctgaagttaagaggctaaccaatttggtcattggaaggatg
ccaattatgctacgaagtagccgttgtgttttgagtgggaaggatgatgttgaattatca
aagcttggggagtgtcctcttgatcctggtggttacttcattgttaaaggaactgagaag
gtgattttgattcaggaacaactctctaagaatcgcatcatcattgacactgatactaag
ggacgggtggcagcatctgttactagtagcacacatgaaacaaaaagcaaaacagtattc
tttatggacaaggggaagatttatctacaactcaatcaatttaataagccgattcctatc
atggtgatcttaaaggctatgggaatggagagtgaccaagagattgtgcaaatggtagga
agagatccacgatatggagatcttctctttccttcaattcaggaatgtgcatttgagaga
atttatactcagcaacaggcattagatttcctagatggaaagattggaagatctaatcct
acaaatcatgggaacaaaaagactggtctagcaaaggttattcttctcgatgtatttctt
gcacatgttccgctctacgagggtaatttccgtcctagatggatatatgcagcagttatg
ttaagacgtatgctagatgcaattttgaataccgatacatttgatgataaggattatttg
ggcaacaaacggctggaactatctggacagatgatttccttgctctttgaggatctgttt
aaatcaatgaacactcatattttagagcttgcgaacagggcatatgaaaaggctagccgc
tccagtcgtctggattttacccattttcttaggcaaaataatgacatcacattaggcttg
gatagatccatttcaacaggtaattgggatttaaaacggtttaaaatgcatcgaaaaggt
gtatctcaggttgtttcaagattatcatatatagcagcgttaggccacatgactcgaata
tctccacagtttgagaagacaaggaaagtaagtgggccaagggcattgcacccaagtcag
tggggcatgctttgcccatgcgacactcctgaaggagaaggttgtgggttgacaaaaaac
ttagctttgttgacacatgttacaactgacgaggaggacggtccactgatttctctgtgc
tacactctaggtgttgaagatttagcacttttatctggcgaggagcttcacttaccagga
tcttttttggttatgtttaatgggcttatacttggaaaacatagacaaccaaagctattt
gccggtaacatgagaaagctccgtagacgtggtaaaattggggagtttgtcagcattttt
gtgaatgaagaacagaattgtgtttatattgcctcggatggtggtcgggtttgtcgtcca
ctagttatcgctgacagaggcatatcaaggatcaaggattatcacatgaaagaattacag
cttggaattcgtacttttgatgattttcttcgggatggattggttgaatatcttgatgtc
aatgaagagaacaatgcattgatagcgttgtatgaatgtgaaaatgacacagatgattct
gaaaagaaaaagtgtgatataacccacatagagattgagcctttgacacttttaggtgtt
tgtgctggtttaattccttatcctcaccacaaccaatctccacgtaatacataccagtgt
gcaatggggaaacaagctatgggtaatattgcttacaatcagctttgtcgagcggattct
ttgctttatttgttggtgtatccccaacgcccattgctgacaacaaaaacaattgaactg
gttggatatgataagctaggagctgggcagaatgcaactgtcgctgttatgagttacagt
ggctatgacattgaggatgcaattgtcatgaacaagtcgtctcttgatcgtggttttggc
cgttgtatatcaatgaaaaagtatacggtagtaaaagagatctatggtaatggtgccaca
gacagaatagttaagccaaggaaggataaggagaatcaaagaatgcagatattagatggt
gatggaattgctgctcccggggagataattcggaacaatgacatttatgttaacaaagaa
agtccaataaataccagggagagaaccggtggtccaacaggtttaaaagatgaagagtac
cgaaaaacacctgctgtgtacaagggccctgaaggtgaaacttgtgtggttgatcgcgtg
atactttgctcggatgctagtaacaagttatgtatcaaatctatcatccgccacactcgg
aggccagagctaggggataaatttagtagcagacatggacagaaaggtgtttgtggtacc
atagttcagcaggaagattttccattttcggagcgtgggatatgccctgatttaattatg
aatccacatggatttcctagtcggatgacaataggcaaaatgattgagcttcttggtgga
aaagctggagtatcttgtggtcgatttcattatggtagtgtatttggagaacctggtggc
catgccgataaggttgaagacataagcaagacacttgtgaagcatggatttagctatagc
ggcaaagatttcctctactccggcattacaggctttccattacaagcatacattttcatg
ggaccaatctactatcagaagttgaaacatatggtaattgataaaatgcatgctcgcgcc
acagggcctcgtgtgatgctgactagacaacctactgaaggaagaagccgagatggagga
ctgcgtctaggagaaatggaacgtgactgtttgatagcatatggtgcgagtatgttgata
tttgaacgtttgatgttgtccagtgacccataccaagttcaggtctgcagccagtgtggt
ctcttagggtactataactacaagttgaagacggcattttgttcaatgtgtaaaaatggc
aaaaatatatccaccatcagacttccatacgcctgcaagcttctattccaggagttgcag
gccatgaacgtcgttccacgtttgaaattagttgaagcatga
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integrated database retrieval system
