Zingiber officinale (ginger): 122020877
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Entry
122020877 CDS
T08725
Name
(RefSeq) actin-related protein 6-like isoform X1
KO
K11662
actin-related protein 6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122020877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122020877
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zof04812
]
122020877
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
122020877
SWR1 complex
122020877
Cytoskeleton proteins [BR:
zof04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actin-related proteins
122020877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
122020877
NCBI-ProteinID:
XP_042434844
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Position
9A:complement(133799159..133809595)
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AA seq
450 aa
AA seq
DB search
MSKGSVVVIDNGAGLCKAGFGGDRDPVAIVPNCVGKSPASKKWLVADELRAADTDVTSVS
LRRPFDRGYLVNPELQREVWDRVIRTLLRVDPNHSSLLLVEPLFNPPSVQRVTDEIVFED
FGFRSLCVADSPSLVHLFEASRGHSHCHQTQCSLVVDCGFSFTHAAPVLQNFTLNYAVKR
LDLGGKVLTNYLKELVSYRSVNVMDETLIIDHAKEKLCFVSLDVSRDLRLARRSGKQNPF
KCTYVLPDGIEHTKGYVKDFDEAQRYLSLPYETLPTVSGQKEELTLSPSNLEKPEQRMKV
DLLQNEFTLTNERFLVPEMLFHPADLGMNQAGLAECIVRAVNSCHPLLHPVLYESILLTG
GSTLFPRFAERLKMELRPLVPDDYQVKITSQEDPILGIWRGGSLLASSPDFESIRLLAAL
FGEIVNLSLRSWADKRFIIIYQGGSIGISF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagggagcgtggtggtcatcgacaatggggcggggctgtgcaaggcggggttt
ggcggagatagggatcccgtggccatcgtccccaactgcgtcggtaagtctcctgcctcc
aagaaatggctggtggcggacgaactccgcgccgccgacaccgacgtcacttccgtgtcc
ctccggcggcccttcgatcgcggctacctcgtcaatccggagctccagagggaggtgtgg
gacagagtgatccgaaccctccttcgcgtcgaccctaaccattcctcgctcctcctggtg
gagcctctcttcaaccctccttctgtccagcgcgtcaccgatgagatcgtgttcgaggat
ttcggcttccgctcactctgcgtcgccgattccccctccctcgtccacctcttcgaggcg
agtcgcggccactcccactgtcatcagactcaatgcagcctcgtggtcgactgcggcttc
tccttcacccacgccgcccccgtgctccaaaacttcacgctcaactacgcggtcaagcgc
ctcgacctcggtggcaaggtcctgaccaactacctcaaggagttagtctcgtaccgctcc
gtcaacgtcatggatgagaccctcatcattgaccacgccaaagagaagctctgcttcgtc
tctctcgatgtgtcacgggatctccgccttgcaaggagaagtggaaaacagaacccattc
aagtgcacatatgttctccctgatggtattgaacatactaaaggctatgtcaaagacttt
gatgaagcacagaggtacctttctctgccgtatgagacattgcccacagtttcaggacaa
aaggaagagctgacactctcaccctccaatttggaaaaaccagaacagaggatgaaagtt
gatttgttgcaaaatgaatttaccctgacaaatgaacgcttccttgtgcctgagatgcta
ttccatcctgctgatttaggtatgaaccaagcaggattagctgaatgcattgtccgagca
gttaattcttgtcatcctcttcttcatcctgtactctatgaaagcattctactgactggt
ggaagcacactatttcctcgttttgcagagagattaaaaatggagcttcgacctcttgtt
cctgatgattatcaagtgaagattacttcacaagaagatcctattctaggcatatggaga
ggtggttcactgttagcatcgagccctgattttgagtcaattcgtttattagctgctctt
tttggtgagattgttaatctctctttaagaagttgggctgacaaacgtttcatcatcatt
tatcaaggtggtagcattggcatctcattttaa
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