Zingiber officinale (ginger): 122020887
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Entry
122020887 CDS
T08725
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic-like
KO
K02357
elongation factor Ts
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122020887
03029 Mitochondrial biogenesis [BR:
zof03029
]
122020887
Translation factors [BR:
zof03012
]
Eukaryotic type
Elongation factors
122020887
Prokaryotic type
122020887
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
122020887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
DPM3
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
122020887
NCBI-ProteinID:
XP_042434857
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All DBs
Position
9A:complement(44687202..44694225)
Genome browser
AA seq
1155 aa
AA seq
DB search
MTPVIHCSVGNITLVPRTVLPPRKEVKLTRCDTSGKDTRLKSYRRFLLSHSSVRLFQLYR
RSGIQTMAAVGTDLTVEETNPTVSEEVVDETLEVPPSSDESSVPSPSKSTTISNQTKRIR
PGRKSEMPPVNEEELVPGASFVGKIRSIQPFGCFVDFGAYTDGLVHVSRISDSYVKDVAS
VVSIGQEVKVRIVEANKETGRISLTMRDKDGTTKVQQKRESTAESGEKPKSFRKTGSRSD
QKRGETKKSSKFAKGQILDGTVKNLIRSGAFISLPDGEEGFLPIEEESESFVILGSSSLQ
VGQEVNVRVLRIARGKVTLTMKKEEDVDELNKQLNQGVVHTATNPFELAFRKNKEISAFL
DERKRTQESLKKIEQTIEVGETVDNSDAFAVDNSAKANGDQTVGSSDSHTKVNDEISINE
EQLEEIPVVDCLSDVVESKDEGSLSALTETVDTVAKEDEKGSELLSHSSRDSVIDEIPVK
GIEDSTEILKEESITSQDSVPDGGESFASNLSFSLAVDDTLSSESKEAADDIRALEKPEG
TLLAAEEAETSSAQVTETGRAAETDEASLPSDDKEAAGDIKSEVSVEQVTETETFVKEEQ
GSEVPSSKEKEGNLNSTQVDDSAGNVKSEASLEQVTETEMTETPAKDEQGSETDDSTGQL
NTKKYYRTIPEDLSKNQFDKPIAIEDVAVPTNSSNAKSDAEGSLNEQTDSSDEPRSVKAT
ISPALVKQLREETGAGMMDCKKALVESGGDIAKAQELLRKKGLASADKKASRTTAEGRIG
SYIHDSRIGILIEVNCETDFVSRGEIFKELVEDLAMQVAACSQVCYLATEDIPEDIVNKE
REIEMQKEDLLSKPENIRSKIVDGRIRKRLEEFVLLEQPYIKNDKMVVKDLVKQTIATIG
ENIKVKRFVRLNLGEGLEKKSQNFAAEIAAQTTAKSSPVVAKDQSTETKEDVEKPKTVAV
SASLVKQLREETGAGMMDCKKALAETEGDIEKAQEYLRKKGLASADKKSSRLAAEGRISA
YIHDARIGTLIEVNCETDFVSRNEKFKELVDDLAMQVVACPQVEFVSIDEIPESIIAKEK
EIEMARDDLKSKPDQIKEKIVEGRITKRLGELALLEQPFIKDDDIKVKDLVKQTVAALGE
NIKVRRFVRFTLGEN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgtaattcattgttctgttggaaatatcactttagttcctcgaactgtttta
ccaccaaggaaagaggtgaagttaacaagatgtgacacatctggaaaggatactaggctc
aaatcatatcgaagatttctgttatcacattcatcagtaagactgtttcagttgtataga
aggtcaggaatccaaaccatggcagctgttggcactgatctaactgtagaagaaacaaat
ccaactgtttcagaggaagttgttgatgaaaccttggaagtaccacctagctctgatgaa
tcaagtgtaccttctccatcaaagtcaaccacaatttcaaatcaaaccaaacgcattagg
cctgggaggaaaagtgagatgcctcctgtgaacgaagaggaattagttccaggtgcttca
tttgtaggaaaaataaggtcaattcaaccatttggttgttttgtcgattttggagcctac
acagatggtttggtacatgtttccaggataagtgactcttatgtcaaagatgttgcatct
gtcgtctctattggacaagaggtgaaagtgagaattgttgaggccaataaggaaacagga
cggatatctctcacaatgcgtgacaaggatggcacaactaaggttcagcagaaaagggaa
tctacagctgaaagtggtgaaaagccaaaatctttcagaaaaactggttcaaggtcagac
caaaagcgaggggaaaccaaaaaaagctctaagtttgcaaagggtcagattttggatggt
actgtgaagaacctcataagatctggagcttttatatcacttccggatggagaggaagga
tttcttccaattgaagaagaatctgaaagctttgttattttagggagttcatcactgcag
gttggccaagaagttaatgtacgagtattacgcattgccagaggaaaggtaactttaaca
atgaaaaaagaagaagatgttgatgaactaaataagcaactaaatcaaggtgtggtacac
acagcaacgaacccattcgagctggcattccgcaagaacaaggaaatttctgctttcttg
gatgagcgaaagaggacacaggagtctcttaaaaagattgaacaaacaatagaagttggt
gaaacagtggataattctgatgcttttgcagttgataattctgcaaaggctaatggggat
cagacagttggttcttctgattcacataccaaggttaatgatgagatatctattaatgaa
gagcagctggaggaaattcccgttgtagattgcctttcggatgttgtggaaagcaaggat
gagggatctctgagtgcattaactgagactgttgatacagttgcaaaagaggatgaaaaa
ggatctgaactcttgagccactcttctcgggattcagttatagatgagattcctgtaaag
ggtattgaagattctacagagattctgaaggaagaaagcataacatcacaagattcagtt
ccggatggaggtgaatcttttgccagcaatttgtcttttagtctggcagtggatgataca
ctgtcttctgaaagtaaagaagcagccgatgatatcagagctttggagaaacctgaaggg
actttgttggctgctgaagaagctgagacctcttcagctcaagtgacagaaactggaaga
gcagctgaaacagatgaagcctcattgccttccgacgataaagaagctgctggtgatatc
aaatctgaggtttctgtagaacaagtgacagaaactgaaacatttgtgaaagaagaacaa
ggttctgaagttccgtcatcaaaagaaaaagagggcaatctaaattctacacaagttgac
gattctgctggtaatgtcaaatctgaggcttctttagaacaagtgacagaaactgaaatg
actgaaacacctgcgaaagatgaacaaggttctgaaactgatgattctactgggcaatta
aataccaaaaagtattacaggactatcccagaggacctttctaaaaaccaattcgataaa
cccatagctattgaagatgtggctgttcccactaactcaagcaatgccaaatcagatgct
gaaggtagcttgaatgagcaaactgactcttctgatgaaccaagatctgtcaaagctact
atttccccagctctggtgaagcaattacgcgaagaaacaggtgctggtatgatggactgc
aagaaggctcttgtagaatctgggggtgacattgctaaggcccaagagttgctccgaaag
aaaggtttagcaagcgcggataaaaaggccagtagaacaactgccgaaggaaggattggg
tcctacatccatgacagcagaataggcatcctcatagaggtgaactgtgaaacggatttc
gtgtctcgaggtgaaatcttcaaggagttggttgaagaccttgctatgcaagtagcagca
tgttctcaggtttgttatttagcaactgaagatatcccagaagatattgtgaacaaggaa
agggaaattgaaatgcagaaggaagaccttttgtcaaaacctgagaacataagatcaaaa
attgttgatggccgaatcaggaagaggcttgaggaatttgtgttgctggagcaaccttac
ataaaaaatgacaagatggtagttaaggatttagttaagcagaccattgctacaattgga
gagaatattaaggtaaaaaggtttgttcgtctcaatcttggagaaggcttggagaagaaa
agccaaaactttgcagccgaaatcgccgcacagactacagctaaatcttcacctgtggtt
gcaaaagatcaatctaccgaaacaaaagaagatgttgagaagccgaaaacagttgcagta
tcagcttcattagtgaagcaacttcgagaggaaacaggtgctggcatgatggactgcaag
aaagctcttgcagagactgaaggagacattgaaaaggctcaggaatacctccgcaagaag
ggactggcatcggctgacaaaaaatcctccagacttgccgcagaaggtcggatttcagcc
tatattcatgatgcgcggatcggcacacttattgaagttaactgcgaaacagactttgtg
agccggaatgagaagttcaaggaattggtggatgatcttgctatgcaagtggtggcctgc
cctcaggttgagtttgtgtcgatagatgaaatcccagagagtatcattgcgaaggaaaaa
gaaatagaaatggcaagagatgatctgaagtcaaagccggaccaaataaaggagaagata
gtggaagggaggatcactaagaggctaggagaacttgctctcttggaacagcccttcatc
aaagatgatgatattaaggtgaaggatctggtgaaacagacagtggctgcgctaggagag
aacatcaaagttagaaggtttgttcgcttcactctcggagagaactga
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integrated database retrieval system
