Zingiber officinale (ginger): 122020909
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Entry
122020909 CDS
T08725
Name
(RefSeq) SAM50-like protein CG7639
KO
K07277
outer membrane protein insertion porin family
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
zof03029
]
122020909
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122020909
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
122020909
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
122020909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
CENP-B_dimeris
U3_snoRNA_assoc
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
122020909
NCBI-ProteinID:
XP_042434887
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All DBs
Position
9A:complement(93975908..93979148)
Genome browser
AA seq
546 aa
AA seq
DB search
MATDPNTEGGVNPKPAEERLRHYVGSEIEDIADARDGEEEEDEEEEEEEEEEEAREVGMR
SAPRKEKLKRAFRRLSQGPVRIRVHDVIIRGNAKTKDALIEAEVFDAFRSASTMQELLQA
ANFANTRLRRLDIFDSVSITLDSGPSELPGTANVVIDIVEVKNPLTGDLGVYTKPEARSW
SLEGSLKLKNLLGYGDIWDASGAYGFDQTSEISVGVALPRFKAISTPITTRISLLSQDWL
KFSSYKEHLLGLSVGLISTKKHDLAYSLTWRNLLDPSRMSSKAIRSQLGHSLLSSIKYTY
KIDHRDSNVRPTRGYAFQSSSHIAGLGPDSKLLRFFRQEFDLRGAIPLGFYNTALNFGVA
AGAILPWVGYTNSTTPLPERFYMGGHSSPICGLGGPTSLLGFKQRGLGPMDLRRVLSPKQ
SQDEATASSGGGDDASGSIASPGRDAIGGDLAVTAFADLSFDLPLKVFQDAGVHGHVFVN
AGNLVMLSEELTNFSFQRFLHTFRSSAGFGIIFPTRFFRMEINYCYILKQFQHDHGKTGI
QFSFST
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaccccaacactgaaggcggcgtgaaccctaaacccgccgaggaaagactc
cgacactacgtcggatcggagatcgaggatattgccgatgcccgagacggcgaagaggag
gaggatgaggaggaggaggaggaagaagaagaggaggaggcgcgggaagtagggatgcgc
tccgccccaaggaaggagaagctcaaacgcgcctttcggcgcctttcgcagggtccggtg
cgcatccgcgtccacgatgtcatcatccgaggcaacgccaagaccaaggacgccctcatc
gaggccgaggtcttcgacgccttccgatccgcttccaccatgcaggagcttctccaggct
gctaacttcgccaacacccgcctccgccggttagatatcttcgattccgtctccatcacg
ctcgattcgggcccctctgagcttcctggcactgccaatgtcgtcatcgatatcgtcgag
gtcaagaacccgctcacgggtgatcttggggtgtacacaaagccggaggctagatcttgg
tcacttgaagggtcactgaagcttaagaacctgttaggctatggagatatttgggatgct
tctggggcttatggttttgatcaaacatcagagattagtgttggagtggccttacccaga
tttaaagcaatttcaactcccatcacaactcgaatttcattactttctcaagattggctg
aaattttcttcatacaaggaacatctgctaggcctctctgttggtctaatatcaactaaa
aagcatgaccttgcttacagtctcacatggcgtaatttacttgacccatcacgcatgtca
tcaaaggcaattcggagccaattagggcatagtcttctctcttccattaaatacacatac
aaaattgatcacagagattcaaatgtgaggccaacacgtgggtatgctttccagtcatcg
tctcacattgctggtcttggaccagatagtaaacttcttcgattttttaggcaggagttt
gatctcagaggtgcaattcctttaggattctacaacactgcactcaattttggagttgca
gcaggtgccatattgccatgggtggggtatacgaattcaactacgccattgcccgagcgg
ttctatatgggtggtcattcgtctcctatctgtggtctgggtggacctacttctctgttg
ggtttcaaacaaagaggcttaggcccaatggatctgcgacgagtactttcacctaaacag
agtcaagatgaagctacagcctcttccggtgggggtgatgatgcttcaggaagcattgcc
tctccaggccgagatgccattggaggtgatctggcagtcactgcctttgctgatctttca
ttcgatctgcctctaaaggtcttccaagatgcaggagttcatggtcacgtatttgtaaat
gctgggaacctagttatgttatccgaggaattgacaaatttctccttccagagattcttg
catacctttcggagctctgctgggtttggcataatcttccctactagattttttcgcatg
gagatcaactactgttacatactgaaacagttccaacatgatcacgggaagacaggcata
cagttcagtttctccacttaa
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