Zingiber officinale (ginger): 122020963
Help
Entry
122020963 CDS
T08725
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122020963
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122020963
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122020963
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122020963
2.5.1.29 geranylgeranyl diphosphate synthase
122020963
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122020963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Terpene_synth_C
Motif
Other DBs
NCBI-GeneID:
122020963
NCBI-ProteinID:
XP_042434959
LinkDB
All DBs
Position
9A:134689168..134690498
Genome browser
AA seq
347 aa
AA seq
DB search
MAYATVVCSYATNMTAKPAAGTVPAGAASRRLAAAVRCVSTPPEPGSLVVERFDLKEYMA
EKGRRVNEALELAVPLRYPELIHRSMRHSLLGGGKRVRPLLAIAACELVGGCEAAAMPVA
CAAEMLHTMSLIHDDLPCMDNDALRRGQPTNHVLFGEETAILAAIALHSFAFEHVAASGS
GVGVAPERVVRAILELSNSVGSEGLVAGQIVDISCEGKEVDMGVLEYIHIHKTARLLEAA
AVSGAIVGGGEEAEVERVRRYARSLGLLFQVVDDILDVTKTSEELGKTAGKDLASDKTTY
PKLLGLDGAREFAHTLVLQAEGELAAFDAARAAPLYHLARFIAYRHN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgccaccgtcgtttgctcctacgccaccaacatgaccgcaaaaccggccgcc
gggactgtacccgccggcgctgcttcccgccgcctggcagctgcggtgcgctgcgtctcg
acgccgccggaacccgggagcctggtggtggagcggttcgacctcaaggagtacatggcg
gagaagggccgcagggtgaacgaggccctggagctggccgtgcccctccgctacccggag
ctcatccaccgatccatgcgccactccctcctcgggggcggcaagcgggtccggccgctc
ctcgccatcgccgcctgcgagctcgtcggcggatgcgaggcggccgccatgcccgtcgcc
tgcgccgccgagatgctccacaccatgtcgctgatccacgacgacctcccctgtatggac
aacgacgccctgcgccgcggccagccgaccaaccacgtcctcttcggcgaggaaacggcc
atactcgccgccatcgccctccactctttcgccttcgagcacgtcgccgccagcggctcc
ggggtcggggtggcgccggagcgcgtcgtccgcgccatactggagctcagcaactccgtc
ggatccgagggcctagtggctggccagattgtggacatttcttgcgaggggaaggaagtg
gacatgggcgtgctggagtacatccacatccacaagactgcgcggctgctggaggcggcc
gcggttagcggggcgatcgtgggcggcggggaggaggcggaggtggagcgggtgcgccgc
tacgcgcgcagcttggggctgctgttccaggtggtggacgacatcctggacgtgacgaag
acgtcggaggagttggggaagacggccgggaaggacctggccagcgacaagaccacctac
ccgaagctgctcggtctggacggcgcccgggaattcgctcacacgctggtgctccaggcc
gagggggagctcgccgccttcgacgccgcccgggccgcgcccctctaccacctcgcccgc
ttcatagcttaccgccacaactag
DBGET
integrated database retrieval system
