KEGG   Zingiber officinale (ginger): 122020997
Entry
122020997         CDS       T08725                                 
Name
(RefSeq) DNA excision repair protein ERCC-1-like
  KO
K10849  DNA excision repair protein ERCC-1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03420  Nucleotide excision repair
zof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122020997
   03460 Fanconi anemia pathway
    122020997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122020997
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122020997
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC
Other DBs
NCBI-GeneID: 122020997
NCBI-ProteinID: XP_042435001
LinkDB
Position
9A:135331140..135337481
AA seq 389 aa
MPEKADDDEDARNNDGTGGDAKPKNSAGVIKIPSYQEVFGTAGSSTPPPHNPYPSFSEAF
SFIKSSEFYTPPPAPPPPSSETTPPSVPPSTVSSVSGSCQNRNSILVSQRQKGNPLLKHV
RNVRWMFADVVCDYLLGQSSCALYISLRYHLLHPDYLYYRIRELQNNYKLRVVLCHVDVE
DVVKPLLEVTRTAMLHDCTLLCGWSFEECARYLETLKVYENKPSDSIREHMHTDYLSRLN
HALTSIRHVNKTDVVTLGSTFGSLSGIMDASMEDLARCPGIGERKVKRLYDTFHEPFRRV
SSRPASVIPETPVKDRNAEEASTSAHDTNELAGQLTNPSGSRKETNPPNIRSALNAAFAK
YAEKVRRQDTKDTSPERGKSGNGKTKKDG
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgcccgagaaggccgacgacgacgaagatgcgaggaataacgacggcaccggcggagac
gcgaagccgaagaattcggctggagtcataaagatcccttcttatcaagaggtcttcggc
acagcgggttcctctacccctccaccccacaatccttacccttccttctccgaagccttc
tccttcattaaatcctccgagttctatacgccgcctcctgctcctcctcctccatcttcc
gaaaccaccccgccgtcggtgccgccttccacggtttcctcggtgagtgggtcgtgtcag
aatcggaattcaattcttgtgagccaacgccagaaggggaacccattgctgaagcatgtt
aggaatgtaagatggatgtttgctgacgttgtttgcgactatttgctgggccagagttct
tgtgctctttatataagtctccgttatcatcttcttcatcctgactacttgtattatcga
attagagaattacaaaacaactataagctgcgagttgtcttgtgccatgttgatgtggaa
gatgttgtgaagccattgctggaagttaccaggacagccatgcttcatgattgcactctt
ctctgtggatggagctttgaagaatgtgctcgatacttggagacattaaaagtgtatgag
aacaaaccctccgacagcattcgtgagcatatgcatacagactatctttcacggctaaat
catgcacttactagcattagacatgtgaacaagactgatgtagtaacactcggttcaact
tttgggtctctgtcaggtattatggatgcttccatggaagatttagctcgctgccctggc
atcggtgaaagaaaggtgaagcgtctctatgatacttttcatgaaccattcaggcgagtt
tcttctcggcctgctagtgtcattccagaaactcctgtcaaggacagaaatgctgaggaa
gctagtacctctgcgcatgataccaatgagcttgctggacagctgacgaatccttccgga
tctcgaaaagaaactaatcctcctaatattagatcggcgctgaatgctgccttcgctaag
tatgctgaaaaggtacgtagacaagacacaaaagacacctcacctgaacgaggaaaatcc
ggcaatggcaagaccaaaaaggatggataa

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