Zingiber officinale (ginger): 122021042
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Entry
122021042 CDS
T08725
Name
(RefSeq) RNA pseudouridine synthase 7-like
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122021042
Enzymes [BR:
zof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
122021042
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122021042
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
122021042
NCBI-ProteinID:
XP_042435045
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Position
9A:26601428..26618831
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AA seq
392 aa
AA seq
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MSGKRKRDGVGGRDGVDMEAIVWQTPANPPEASDYIFRRGKRYVRPYYFEFISHVKNRWA
GKTIVDLFAEEFKGRPYDYYVNAVKCGRIQVDDKMVNTLYIVQSSQKISHFLHRHEPPVL
AEDVQILQNETDIVTICKPASIPVHPCGQYRKNTIVGILQAEHNLTPLYPVHRLDRLVSG
LLIFAKSADKADCLRQQIEAGLLRKEYIAKVIGVFPNEEVVVDANISYNAREGRSYVEID
DCHLDKALRGKTACTKFSRISTNGKYSLVLCQPVTGRTHQIRVHLQHAGHPIANDGLYLS
KDAPLRSAKGVGADRAAIETCELPISEPAKDDPYAEDASGEEFSIDPMCTNCPNLPPNGY
DGNEVGMWLHCVRYSGPDWSYECPYPEWAHLS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaaaaggaaacgcgacggcgttggcggccgcgacggagtggatatggaggcg
atagtgtggcaaaccccagccaatcctcccgaagccagtgattacatcttccgcagaggg
aagcgatacgtgagaccctactactttgagttcatctcccacgttaagaacaggtgggcc
ggcaagactattgtggatctctttgcggaggagttcaaagggcgcccttacgactattat
gtaaatgctgtgaagtgtggaaggatccaagtggatgataagatggtcaacacgttgtat
attgtgcagtcgtctcaaaagattagccactttcttcataggcatgagccaccagtatta
gctgaagatgtacaaatcctgcaaaatgaaactgatatagtaacaatttgcaagccagca
tcaattccggtacatccatgtggtcagtatcgcaagaataccattgttggcatactgcag
gctgaacacaacttaacaccactgtaccctgtgcatcgattagaccgtcttgtttctggt
cttcttatctttgcaaaaagtgctgataaagcagattgcttaagacaacagattgaggct
gggttattacgaaaagagtacattgctaaggtgattggtgtgtttcccaatgaagaggta
gttgttgatgcaaatatcagctataacgcacgagaagggaggagttatgtggagattgat
gattgccatcttgataaagctttgagaggaaagactgcatgcacaaagttttcacggatt
agtaccaacgggaaatatagtctagttttgtgccaacctgttactggacgtacccatcag
attcgtgtacatctccaacatgcaggccatcctatagctaatgatggcttatacctctcc
aaagatgcccctcttcgttctgctaaaggagttggcgcagatagagctgccatagaaaca
tgtgaactaccaatatctgagcctgctaaggatgatccttatgctgaagatgcttctggt
gaagagttcagcatcgatcccatgtgcactaactgtccaaatctgcctcccaatggatat
gatggaaatgaggtgggcatgtggctacattgcgtccgttattcaggacctgattggagt
tatgaatgcccttaccctgagtgggctcatctcagctga
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