Zingiber officinale (ginger): 122021155
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Entry
122021155 CDS
T08725
Name
(RefSeq) phenylalanine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122021155
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122021155
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122021155
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
122021155
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class II (U)
122021155
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122021155
Prokaryotic type
122021155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
122021155
NCBI-ProteinID:
XP_042435170
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Position
9A:complement(22900017..22906151)
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AA seq
458 aa
AA seq
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MLISRGGTCARALLLLSTRMAASSISSNLIAPASASRRIHGSKPFSTQLLSYPPFLSRAS
LFSSHASVHSNKVHKKSNSRVAALLEIGGVKIAKDDVVRESDPTNNVPDSIFSKIGLQLH
RRDNHPIGILKNAIYEYFDTSYSSMFVKFDDLCPIVSVQQNFDEVLVPADHVSRSYNDTY
YVDAGTVLRCHTSAHQAELLRAGHSHFLVTGDVYRRDSIDSTHYPVFHQMEGVRVFSPDE
WEVSSTDATSYAATNLKKCLEGLARHLFGAVEMRWVDTYFPFTNPSFELEIYFQEKWMEV
LGCGVTEQEILNRNGRKDSVAWAFGLGLERLAMVLFDIPDIRLFWSTDQRLTSQFSAGKL
GVKFKPFSKFPPCYKDISFWISDSFTENNLCEVVRGIAGDLVEEVKLIDNFTNKKGMTSH
CYRIAFRSMERSLTDEEINQLQWSIRETVQTKLHVTLR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcttatctcaagaggtggcacctgcgcccgcgcgctgctgctgctctccactcgcatg
gcggcatcctcaatatcctccaacctcatcgcgcccgcctctgcctcacgccgcattcat
ggttcgaagcccttctccacccagctcctctcctatccgccctttttatcccgcgcttcc
cttttctcctctcatgcctctgtccactccaacaaggttcataagaaatccaattccagg
gtcgcggctctcctcgagattggcggcgtcaaaattgccaaagatgatgttgtccgggaa
agcgatcccacaaacaatgtgccagacagtatattttcgaagatcggtctgcaactacat
cgaagggacaaccatccgattggaatattgaagaatgccatctatgagtatttcgacacc
agttactcctccatgttcgtcaaatttgatgacctttgtcccattgtttccgtgcagcag
aattttgatgaggtgttagtgcctgctgatcatgtaagcaggagttacaatgatacatat
tatgttgatgcgggcactgtcttaaggtgtcataccagtgctcatcaggcagagttactg
agggcagggcacagccattttcttgtaactggggatgtgtaccgtagagattccattgat
tcaacccattatcctgtgtttcatcagatggaaggggtccgtgtcttctctccagatgaa
tgggaggtttctagcactgatgcaacatcttatgcagcaacaaatctaaagaagtgtctc
gagggtttagcaaggcatctttttggtgctgtggaaatgcgatgggttgatacttatttt
ccattcaccaacccatctttcgaattagagatttattttcaggaaaaatggatggaagtg
ttgggatgtggagtgactgaacaggaaattcttaacagaaatggtaggaaagattctgtt
gcatgggcctttgggcttggattagaaagacttgcaatggttctctttgatataccagat
attcgacttttttggtcaactgatcagaggcttacttcacaattttccgcgggcaagctt
ggtgtcaagttcaaaccattttccaagtttcctccctgctacaaggatattagtttttgg
atcagtgattcctttacagagaacaacttatgtgaagtcgttagaggaattgctggggat
cttgtggaagaggtgaagttgattgataatttcaccaataagaagggtatgactagccat
tgttacagaattgcattcagatccatggaaaggtcgcttaccgatgaggagataaaccag
ctacagtggagtatcagggaaacagtgcagacaaagttgcatgtcacactacgataa
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