Zingiber officinale (ginger): 122021192
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Entry
122021192 CDS
T08725
Name
(RefSeq) transcription factor-like protein DPB
KO
K04683
transcription factor Dp-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122021192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122021192
03036 Chromosome and associated proteins [BR:
zof03036
]
122021192
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122021192
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122021192
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
122021192
NCBI-ProteinID:
XP_042435204
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Position
9A:complement(90130389..90138374)
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AA seq
338 aa
AA seq
DB search
MNDGSKSTARASFGTPAFSGGQSASTSSSVGSPSSRIEPVATTPASENTLVRLNHLEIQR
DDVGTPEVAVGTKKKKRGARAVSGDKSGRGLRQFSMKVCEKVESKGRTTYNEVADELVTE
FADPNNNPGSQDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSLNDIEE
LKTERIGLRNRIEKKTAYLQELQDQYLGLQNLVQRNEQLYGSGNLPSGGVALPFILVQTR
PHATVEVEISEDMQLVHFDFNSTPFELHDHSYVIKAMGLCEGEKEDDALPRPNGGNCSSM
MGMPQDHTSQPSQPSSMGRQIISPPKPGILKSRVKNEH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgggagcaagagcaccgccagagcctccttcggcacgccagccttctccggc
ggtcaatcggcctccaccagcagcagcgtgggctcgccctccagccggatcgagccagtg
gcgaccacgcccgccagcgagaacaccttggtcaggctgaatcacctcgaaatccagagg
gacgacgtgggaacgccagaagtagccgtgggcactaaaaagaaaaaaaggggtgctcga
gcagtttcaggtgataaaagtggaaggggactccgacaattcagcatgaaagtttgtgag
aaagttgaaagcaagggacgtactacttacaatgaggttgcagatgaacttgttacagag
tttgcagatcccaacaataatccaggatctcaagatcagcaacagtatgatgaaaagaac
ataaggcgaagggtgtatgatgcactgaatgttctcatggctatggatattatctctaaa
gataaaaaggagatacaatggaaaggtttaccacgaactagtttaaatgacattgaagaa
ttaaagacagagcgaattggattgaggaataggattgaaaagaaaactgcatatttgcaa
gaattgcaagatcaatatttaggtctccaaaacttggtgcaaaggaatgagcagttgtat
ggatcaggaaatctcccatctggtggtgttgctctaccttttatcttagttcagactcgt
cctcatgccacagttgaggtggaaatttcagaagacatgcaactggtgcattttgacttt
aacagtaccccattcgaactccatgatcattcatatgtcattaaagcaatgggattatgc
gaaggagagaaagaagatgacgctctgccacgtcctaatggaggcaattgctccagcatg
atgggcatgccccaggatcatacatcacaaccttctcaacccagttcaatgggtagacaa
ataatttctccccctaaacctggaattttaaagtcacgcgtgaagaatgaacattaa
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