Zingiber officinale (ginger): 122021265
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Entry
122021265 CDS
T08725
Name
(RefSeq) TBC1 domain family member 13-like isoform X1
KO
K24796
TBC1 domain family member 13
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122021265
Membrane trafficking [BR:
zof04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122021265
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
122021265
NCBI-ProteinID:
XP_042435300
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All DBs
Position
9A:77855486..77896601
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AA seq
439 aa
AA seq
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MVMKKKSVPEWLNSPLWYSKPPDDRPISHYNTKTLRPDSSPPPPPPPPPLSKSPSLPALL
GSERSDLPSGEPSPCHPWLEEEPRDSELLVDFRITLSKRVINLGEVRKLACQGVPHAVRP
TVWKLLLGYFPLDHTLWALELEKKMKQYNKLKDDLLLNPSEITRRMEASAATKTEELANE
NIGLLSRSEIKHEEHPLSLSKTSVWNQYFQEAEILEQIDRDVKRTHPEMEFFCGDSPIAK
TNQEALRRILIIFTKLNPSIKYVQGMHEVVAPLFYVFRNDLDGTNATFAEADTFFCFAEL
LNIFRDNFCKQLDYSVVGIQSKMEKLSQLLKRHDEELWRHLEVITKVSPQFYAFRWISIL
LMREFNLTECLHIWDVLLSDPEGPQETLLRICCAMLILVRRRLLAGDFIANLKLLQNFPN
TNISHILHIANKLRGPTVD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgaagaagaagagcgtgcccgagtggctaaacagccccctctggtattccaag
ccacctgatgatcgccccatctcccactacaatacaaaaactctaagaccggactcttcg
ccgccgccgccgccgccgccgccgccgctttctaaatctccttcccttcctgcgcttctc
ggttccgagagatcggacttaccctccggcgagccgagtccatgtcatccttggttagag
gaggaaccccgcgactcggagctcttagtcgacttccggatcacgttgtcgaagagggtc
atcaatcttggggaggtgcggaaattagcgtgtcagggagttccgcatgccgtgcgtccg
acagtatggaagcttttgttgggttattttccacttgatcacacattatgggcacttgaa
ttggagaagaagatgaagcagtataataagcttaaagatgatttactgctaaacccctca
gaaatcacgcgtagaatggaagcttcagctgccacaaaaactgaagagttagctaatgaa
aacattggcttgctttcaaggtcagagataaagcatgaagagcatcctttgagtcttagt
aaaactagtgtatggaatcaatactttcaggaggctgagattctggaacagattgatcga
gatgtaaaacgtactcatccagagatggaatttttttgtggagactctcctattgcaaag
actaatcaggaagctttaaggcgtatacttattatcttcacaaaattgaatcctagtata
aaatatgtacagggaatgcacgaagttgtagcacctctcttctatgtctttaggaatgat
ctagatggcactaatgcgacctttgcagaggccgacacttttttctgttttgccgaacta
ctcaatattttcagggataacttctgcaaacaacttgactatagtgttgttggcatccag
tctaaaatggagaaattatcacagcttctgaaaagacatgatgaagagctttggagacat
ttggaagtcataacaaaagtaagtcctcaattctatgcttttagatggatttcaatacta
ttgatgcgcgagttcaaccttactgagtgtctgcatatctgggatgttcttttaagtgat
ccagaaggcccacaagaaacgttgctgcgaatttgctgtgctatgttgatacttgttcga
aggcgtcttttggcgggtgatttcattgctaatctcaagctcttacaaaattttccaaac
acaaacatcagccatatcctccatatcgcaaacaaactacgagggccaacagttgactaa
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