Zingiber officinale (ginger): 122021297
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Entry
122021297 CDS
T08725
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1-like
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00541
Biosynthesis of various nucleotide sugars
zof01100
Metabolic pathways
zof01250
Biosynthesis of nucleotide sugars
Module
zof_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
122021297
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
122021297
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
122021297
NCBI-ProteinID:
XP_042435332
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All DBs
Position
9A:complement(104852651..104855147)
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AA seq
670 aa
AA seq
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MANYTPRNILITGAAGFIASHVANRLVRNYPHYKVVVLDKLDYCSSLNNLNPSRASPNFK
FVKGDIASADLVQFLLVTESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGLVRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMRGQPLPIHGDGSNVRSYLYCEDVAEAFEVVLH
RGEIGHIYNIGTKKERRVVDVARDICGLFNMNPDSLIKFVDNRPFNDQRYFLDDQKLKNL
GWCERTTWEDGLRKTMEWYTSNPQWWGDVSGALVPHPRMLMIPGIIGQEAAKDKNLQTSI
NFNQTGMIVPAPKNTKPSLKFLIYGRTGWIGGLLGKICEKKGIPFEYGKGRLQERSQIEF
DIQSVKPTHVLNAAGVTGRPNVDWCESHKTETIRTNVVGTLTLADVCREHGLLLLNYATG
CIFEYDGAHPEGSGIGFKEEDMPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDL
KNPRNFITKIARYNKVVNIPNSMTILDELLPISIEMAKRNCRGIWNFTNPGVVSHNEILE
MYKKYIDPSFEWVNFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSVKESLIKYVFQPN
SKVPVGGEAN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacacgccgaggaacatcctcatcaccggggctgccggcttcatcgcctcc
cacgtcgccaaccgcctggtccggaactatccgcactacaaggtggtggtcctcgataag
ctcgactactgctccagcctcaacaacctcaacccttcccgtgcctcccccaacttcaag
ttcgttaagggcgacatcgccagcgccgaccttgtccagttccttctcgtcaccgagtcc
atcgacaccatcatgcacttcgccgctcagacccacgtcgataactccttcggaaactcc
ttcgagttcaccaagaacaacatctacggcacccacgtcctgctcgaagcctgcaaggtt
accggtctggtccgccgcttcatccacgtcagcacggacgaggtctacggagagaccgac
gaggacgcggtggtcggaaaccacgaagcatcgcagctgctacccacgaacccctactcc
gccaccaaggccggcgcggagatgctcgtgatggcctacggacgctcctacggcctcccc
gtcatcaccacccgcggcaacaacgtctacgggcccaaccagttcccggagaagctgatc
cccaaattcattctcctcgccatgaggggtcaaccactccccatccacggtgatgggtcc
aatgtgaggagctacctctactgcgaggacgtcgctgaggccttcgaagtagtcctccac
cgaggcgagatcggtcatatctataacatcggcaccaagaaggagcgcagggtggtcgat
gtggccagggacatctgcggtctcttcaatatgaatcctgattccctcattaagttcgtg
gacaaccggccctttaacgaccagaggtacttccttgacgaccagaagctgaagaacttg
ggctggtgcgaacggaccacatgggaggacgggctacggaagacaatggagtggtacacc
agcaacccccaatggtggggtgatgtctccggcgcattggtgccgcatccccggatgctg
atgattcccggaatcatcgggcaagaagccgccaaggacaagaatttgcaaaccagcatc
aattttaatcaaacaggaatgattgtccctgctcccaagaacactaaaccgtctctcaag
tttctgatatatggtcggacagggtggatcggtggcctgctcgggaagatttgtgagaag
aagggcatacctttcgagtacggaaaggggcgtcttcaagagcgctcgcagatcgaattc
gacatccagtcggtgaagccaacacacgttcttaatgctgcaggcgtgactggcaggccc
aatgtcgactggtgtgagtctcacaagacggagacaatccgcaccaatgtggtgggcact
cttactcttgcagatgtctgtagggagcatgggttgttgttgctgaattatgctactgga
tgtatctttgagtatgatggtgcacatccagaagggtcaggcattggcttcaaggaggaa
gacatgccaaattttactggttcattctactcgaagactaaagctatggtcgaagaactt
ctcaaggagtatgacaatgtgtgcacgctgagggttcgaatgccgatctcatcagacctc
aaaaaccctcggaacttcatcaccaagatcgcccgttacaacaaagtggtgaacattccc
aacagcatgaccatcttggatgagcttttgccaatttctattgagatggccaaaaggaac
tgtcgtggaatctggaactttacaaatcctggtgtggtcagtcacaatgaaattctggag
atgtacaagaagtacatcgaccccagctttgagtgggttaactttaccctggaagagcag
gccaaggtgattgtggcaccccggagcaacaacgagatggatgcttcaaagctgaagaaa
gagtttcccgagctactctctgtgaaggaatcactcatcaagtatgtctttcagccaaat
agcaaggtccctgttggtggagaagccaactga
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